RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SELEP16581 610 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 GINS3Q9BRX5 216 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 ZDHHC8Q9ULC8 765 aa11.45□□□□□ -0.58
PCDHGB3-201ENST00000576222 E9PQ18 207 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 IGHV1OR21-1A0A087WYE8 117 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 A0A0U1RQV5 110 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 PRR32B1ATL7 298 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 CRYAAP02489 173 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 STUMQ69YW2 141 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 Q8IYB0 196 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 FAM117AQ9C073 453 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 NDUFA2O43678 99 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 RHOBP62745 196 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 RAC1P63000 192 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 TMEM92Q6UXU6 159 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 CISD2Q8N5K1 135 aaKnown RBP11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 OR1K1Q8NGR3 316 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 P2RX4Q99571 388 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 SPSB2Q99619 263 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 OR2W1Q9Y3N9 320 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 TPRP12270 2363 aaKnown RBP11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 RPL36A-HNRNPH2H7BZ11 118 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 PDE6DO43924 150 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 ZNF735P0CB33 412 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 PSG2P11465 335 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 ABLIM2Q6H8Q1 611 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 RHBDD1Q8TEB9 315 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 OR2D2Q9H210 308 aa11.44□□□□□ -0.58
PCDHGB3-201ENST00000576222 K7EQS6 105 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 LAMTOR5O43504 91 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 PCP4P48539 62 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 TMEM187Q14656 261 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 LINC00114Q6XXX2 140 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 ABHD14BQ96IU4 210 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 TOX3O15405 576 aaPredicted RBP11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 FOLR2P14207 255 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 SUB1P53999 127 aaKnown RBP eCLIP11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 PAFAH1B2P68402 229 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 WIPI1Q5MNZ9 446 aaPredicted RBP11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 PTCRAQ6ISU1 281 aaPredicted RBP11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 MOB3AQ96BX8 217 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 PLPPR2Q96GM1 343 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 XIRP1Q702N8 1843 aaKnown RBP11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 SNURFLB1AK76 121 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 MS4A18H0YCH9 400 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 LYPD3O95274 346 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 HIST1H1BP16401 226 aaKnown RBP11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 MS4A18Q3C1V0 323 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 COX19Q49B96 90 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 TMEM183AQ8IXX5 376 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 RFESDQ8TAC1 157 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 DTD1Q8TEA8 209 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 KIF26BQ2KJY2 2108 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 LTBP1Q14766 1721 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 SIP14410 1827 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 M0R1X1 148 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 ST8SIA5O15466 376 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 ENSAO43768 121 aaKnown RBP11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 TSPAN2O60636 221 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 BCL3P20749 454 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 CA6P23280 308 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 F2RP25116 425 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 IER3P46695 156 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 EIF3IQ13347 325 aaKnown RBP11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 SMAD4Q13485 552 aaKnown RBP11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 CYB5R2Q6BCY4 276 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 S100A7AQ86SG5 101 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 OR1L6Q8NGR2 347 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 HSPB9Q9BQS6 159 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 RTBDNQ9BSG5 229 aaPredicted RBP11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 SLC45A2Q9UMX9 530 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 LHFPL6Q9Y693 200 aa11.43□□□□□ -0.58
PCDHGB3-201ENST00000576222 RTTNQ86VV8 2226 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 SIAH2O43255 324 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 SRP14P37108 136 aaKnown RBP11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 GTF2H5Q6ZYL4 71 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 DOCK4Q8N1I0 1966 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 DIRC3C9JPN6 131 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 FCGR3BO75015 233 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 KIR2DL1P43626 348 aaPredicted RBP11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 RBM11P57052 281 aaKnown RBP11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 ZNF506Q5JVG8 444 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 C11orf42Q8N5U0 333 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 CISD1Q9NZ45 108 aaKnown RBP11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 PIAS2O75928 621 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 CCL2P13500 99 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 USF1P22415 310 aaPredicted RBP11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 MST1P26927 711 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 OR3A1P47881 315 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 TCL1AP56279 114 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 Q6ZS52 159 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 SRD5A3Q9H8P0 318 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 OCIAD1Q9NX40 245 aa11.42□□□□□ -0.58
PCDHGB3-201ENST00000576222 LOC101059948A0A1B0GTJ6 334 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 J3QR89 54 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 GALR2O43603 387 aaPredicted RBP11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 SRP19P09132 144 aaKnown RBP11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 LURAP1LQ8IV03 231 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 COMMD5Q9GZQ3 224 aa11.41□□□□□ -0.58
PCDHGB3-201ENST00000576222 TMEM74BQ9NUR3 256 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms