RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 GZMHP20718 246 aa20.79■□□□□ 0.92
NPLOC4-215ENST00000574095 BANF2Q9H503 90 aa20.79■□□□□ 0.92
NPLOC4-215ENST00000574095 OPN1MWP04001 364 aa20.78■□□□□ 0.92
NPLOC4-215ENST00000574095 AMY1AP04745 511 aa20.78■□□□□ 0.92
NPLOC4-215ENST00000574095 AMY2AP04746 511 aa20.78■□□□□ 0.92
NPLOC4-215ENST00000574095 CDK1P06493 297 aa20.78■□□□□ 0.92
NPLOC4-215ENST00000574095 LPLP06858 475 aa20.78■□□□□ 0.92
NPLOC4-215ENST00000574095 OPN1MW2P0DN77 364 aa20.78■□□□□ 0.92
NPLOC4-215ENST00000574095 OPN1MW3P0DN78 364 aa20.78■□□□□ 0.92
NPLOC4-215ENST00000574095 C6orf141Q5SZD1 244 aa20.78■□□□□ 0.92
NPLOC4-215ENST00000574095 SLC16A12Q6ZSM3 486 aa20.78■□□□□ 0.92
NPLOC4-215ENST00000574095 LYPD6Q86Y78 171 aa20.78■□□□□ 0.92
NPLOC4-215ENST00000574095 CDH26Q8IXH8 852 aa20.78■□□□□ 0.92
NPLOC4-215ENST00000574095 ARL11Q969Q4 196 aa20.78■□□□□ 0.92
NPLOC4-215ENST00000574095 FAM90A18PA6NE21 464 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 FAM90A16PA6NEW6 464 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 FAM90A20PA6NIJ5 464 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 FAM90A9PA6NNJ1 464 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 FAM90A12PA8MX19 464 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 FAM90A5PA8MXJ8 464 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 C15orf65H3BRN8 121 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 MT-ND4P03905 459 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 FAM90A15PP0C7V4 464 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 FAM90A13PP0C7W8 464 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 FAM90A14PP0C7W9 464 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 FAM90A24PP0C7X0 464 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 FAM106CPP0CH98 169 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 EMX1Q04741 257 aaPredicted RBP20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 MADCAM1Q13477 382 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 INSL4Q14641 139 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 ZNF497Q6ZNH5 498 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 NDUFA11Q86Y39 141 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 OR5AU1Q8NGC0 362 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 OR10X1Q8NGY0 326 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 OR56B4Q8NH76 319 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 NRG4Q8WWG1 115 aa20.77■□□□□ 0.92
NPLOC4-215ENST00000574095 PLXNB1O43157 2135 aa20.77■□□□□ 0.91
NPLOC4-215ENST00000574095 ADARB2-AS1A8MUL3 147 aa20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 MCRIP1C9JLW8 97 aa20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 SNRNP70P08621 437 aaKnown RBP20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 VHLP40337 213 aa20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 AQP4P55087 323 aa20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 RNLSQ5VYX0 342 aa20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 FAM53AQ6NSI3 398 aaPredicted RBP20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 CENPVQ7Z7K6 275 aaPredicted RBP20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 DRAM1Q8N682 238 aa20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 TMEM104Q8NE00 496 aa20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 SGCDQ92629 289 aa20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 MRPS24Q96EL2 167 aaKnown RBP20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 MND1Q9BWT6 205 aa20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 SELENOIQ9C0D9 397 aa20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 SPACA1Q9HBV2 294 aa20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 RCC2Q9P258 522 aaKnown RBP20.76■□□□□ 0.91
NPLOC4-215ENST00000574095 IGHV3-43A0A0B4J1X8 118 aa20.75■□□□□ 0.91
NPLOC4-215ENST00000574095 A0A1W2PPI3 338 aa20.75■□□□□ 0.91
NPLOC4-215ENST00000574095 AIPO00170 330 aa20.75■□□□□ 0.91
NPLOC4-215ENST00000574095 CRTAPO75718 401 aaPredicted RBP20.75■□□□□ 0.91
NPLOC4-215ENST00000574095 IGHV3-43DP0DP04 118 aa20.75■□□□□ 0.91
NPLOC4-215ENST00000574095 MAPK3P27361 379 aaPredicted RBP20.75■□□□□ 0.91
NPLOC4-215ENST00000574095 GABPB1Q06547 395 aaPredicted RBP20.75■□□□□ 0.91
NPLOC4-215ENST00000574095 ACSM3Q53FZ2 586 aa20.75■□□□□ 0.91
NPLOC4-215ENST00000574095 C9orf152Q5JTZ5 239 aa20.75■□□□□ 0.91
NPLOC4-215ENST00000574095 RAB12Q6IQ22 244 aa20.75■□□□□ 0.91
NPLOC4-215ENST00000574095 THNSL2Q86YJ6 484 aa20.75■□□□□ 0.91
NPLOC4-215ENST00000574095 THRSPQ92748 146 aa20.75■□□□□ 0.91
NPLOC4-215ENST00000574095 MYDGFQ969H8 173 aa20.75■□□□□ 0.91
NPLOC4-215ENST00000574095 SCN3BQ9NY72 215 aa20.75■□□□□ 0.91
NPLOC4-215ENST00000574095 G3V4G9 280 aa20.74■□□□□ 0.91
NPLOC4-215ENST00000574095 SDCBPO00560 298 aaPredicted RBP20.74■□□□□ 0.91
NPLOC4-215ENST00000574095 ORC5O43913 435 aa20.74■□□□□ 0.91
NPLOC4-215ENST00000574095 MGMTP16455 207 aa20.74■□□□□ 0.91
NPLOC4-215ENST00000574095 RAB7AP51149 207 aa20.74■□□□□ 0.91
NPLOC4-215ENST00000574095 FAM27D1Q5T7N8 215 aa20.74■□□□□ 0.91
NPLOC4-215ENST00000574095 UNQ9370/PRO34162Q6UXP9 181 aa20.74■□□□□ 0.91
NPLOC4-215ENST00000574095 NKAIN3Q8N8D7 197 aa20.74■□□□□ 0.91
NPLOC4-215ENST00000574095 R3HDM4Q96D70 268 aa20.74■□□□□ 0.91
NPLOC4-215ENST00000574095 CYYR1Q96J86 154 aa20.74■□□□□ 0.91
NPLOC4-215ENST00000574095 TMED9Q9BVK6 235 aa20.74■□□□□ 0.91
NPLOC4-215ENST00000574095 ETAA1Q9NY74 926 aa20.74■□□□□ 0.91
NPLOC4-215ENST00000574095 PEX16Q9Y5Y5 336 aa20.74■□□□□ 0.91
NPLOC4-215ENST00000574095 GP2P55259 537 aaKnown RBP20.73■□□□□ 0.91
NPLOC4-215ENST00000574095 LOXL3P58215 753 aa20.73■□□□□ 0.91
NPLOC4-215ENST00000574095 HES1Q14469 280 aa20.73■□□□□ 0.91
NPLOC4-215ENST00000574095 HNF4GQ14541 408 aa20.73■□□□□ 0.91
NPLOC4-215ENST00000574095 SYT6Q5T7P8 510 aaPredicted RBP20.73■□□□□ 0.91
NPLOC4-215ENST00000574095 MS4A15Q8N5U1 240 aa20.73■□□□□ 0.91
NPLOC4-215ENST00000574095 OR52M1Q8NGK5 317 aa20.73■□□□□ 0.91
NPLOC4-215ENST00000574095 OR4K15Q8NH41 348 aa20.73■□□□□ 0.91
NPLOC4-215ENST00000574095 UQCC2Q9BRT2 126 aa20.73■□□□□ 0.91
NPLOC4-215ENST00000574095 GFOD1Q9NXC2 390 aa20.73■□□□□ 0.91
NPLOC4-215ENST00000574095 TRAPPC2LQ9UL33 140 aa20.73■□□□□ 0.91
NPLOC4-215ENST00000574095 LSM2Q9Y333 95 aaKnown RBP20.73■□□□□ 0.91
NPLOC4-215ENST00000574095 MOB4Q9Y3A3 225 aa20.73■□□□□ 0.91
NPLOC4-215ENST00000574095 CD83Q01151 205 aa20.72■□□□□ 0.91
NPLOC4-215ENST00000574095 SPHARQ15513 63 aa20.72■□□□□ 0.91
NPLOC4-215ENST00000574095 MED22Q15528 200 aa20.72■□□□□ 0.91
NPLOC4-215ENST00000574095 OR8H3Q8N146 312 aa20.72■□□□□ 0.91
NPLOC4-215ENST00000574095 FAM46BQ96A09 425 aa20.72■□□□□ 0.91
NPLOC4-215ENST00000574095 A0A1W2PRX2 142 aa20.71■□□□□ 0.91
NPLOC4-215ENST00000574095 C12orf77C9JDV5 145 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms