RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 LIN7BQ9HAP6 207 aa4.32□□□□□ -1.72
CHD3-212ENST00000570758 RCC2Q9P258 522 aaKnown RBP4.32□□□□□ -1.72
CHD3-212ENST00000570758 CKLFQ9UBR5 152 aa4.32□□□□□ -1.72
CHD3-212ENST00000570758 PSG11Q9UQ72 335 aa4.32□□□□□ -1.72
CHD3-212ENST00000570758 MGAM2Q2M2H8 2515 aa4.32□□□□□ -1.72
CHD3-212ENST00000570758 WNK1Q9H4A3 2382 aa4.32□□□□□ -1.72
CHD3-212ENST00000570758 TET2Q6N021 2002 aaPredicted RBP4.31□□□□□ -1.72
CHD3-212ENST00000570758 IGHV3-43A0A0B4J1X8 118 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 UBE2QL1A1L167 161 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 FAM90A18PA6NE21 464 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 FAM90A16PA6NEW6 464 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 ERICH4A6NGS2 130 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 FAM90A20PA6NIJ5 464 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 FAM90A9PA6NNJ1 464 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 FAM90A12PA8MX19 464 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 FAM90A5PA8MXJ8 464 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 OOSP1A8MZH6 123 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 MCRIP1C9JLW8 97 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 H0YHG0 523 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 AIPO00170 330 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 SDCBPO00560 298 aaPredicted RBP4.31□□□□□ -1.72
CHD3-212ENST00000570758 SLC31A2O15432 143 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 CRTAPO75718 401 aaPredicted RBP4.31□□□□□ -1.72
CHD3-212ENST00000570758 OR2F2O95006 317 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 LPLP06858 475 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 SNRNP70P08621 437 aaKnown RBP4.31□□□□□ -1.72
CHD3-212ENST00000570758 FAM90A15PP0C7V4 464 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 FAM90A13PP0C7W8 464 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 FAM90A14PP0C7W9 464 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 FAM90A24PP0C7X0 464 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 IGHV3-43DP0DP04 118 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 MGMTP16455 207 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 GZMHP20718 246 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 MYF6P23409 242 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 CEACAM3P40198 252 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 MNDAP41218 407 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 MAP2K4P45985 399 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 REG1BP48304 166 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 LOXL3P58215 753 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 GPR176Q14439 515 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 SPHARQ15513 63 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 MED22Q15528 200 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 NSUN5P1Q3KNT7 163 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 ABCA11PQ4W5N1 156 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 C1orf100Q5SVJ3 147 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 LIPKQ5VXJ0 399 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 AWAT2Q6E213 333 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 OR10K2Q6IF99 312 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 RAB12Q6IQ22 244 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 CCDC144NLQ6NUI1 221 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 C10orf99Q6UWK7 81 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 SLC16A12Q6ZSM3 486 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 C16orf82Q7Z2V1 217 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 CEACAM19Q7Z692 300 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 GAPTQ8N292 157 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 DRAM1Q8N682 238 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 DTX3Q8N9I9 347 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 OR10A7Q8NGE5 316 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 OR4K15Q8NH41 348 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 OR56B4Q8NH76 319 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 OR1L1Q8NH94 360 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 NEK7Q8TDX7 302 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 CAPSLQ8WWF8 208 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 MYDGFQ969H8 173 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 RPEQ96AT9 228 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 CREB3L1Q96BA8 519 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 RBMXL1Q96E39 390 aaKnown RBP4.31□□□□□ -1.72
CHD3-212ENST00000570758 MRPS24Q96EL2 167 aaKnown RBP4.31□□□□□ -1.72
CHD3-212ENST00000570758 Q96M66 194 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 GFI1Q99684 422 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 CITED2Q99967 270 aaPredicted RBP4.31□□□□□ -1.72
CHD3-212ENST00000570758 UQCC2Q9BRT2 126 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 ANKRD60Q9BZ19 345 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 SELENOIQ9C0D9 397 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 KCNK15Q9H427 330 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 DUSP21Q9H596 190 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 PCDHB16Q9NRJ7 776 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 GFOD1Q9NXC2 390 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 SCN3BQ9NY72 215 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 ETAA1Q9NY74 926 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 TPRKBQ9Y3C4 175 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 AMMECR1Q9Y4X0 333 aaPredicted RBP4.31□□□□□ -1.72
CHD3-212ENST00000570758 PEX16Q9Y5Y5 336 aa4.31□□□□□ -1.72
CHD3-212ENST00000570758 IGHV3-72A0A0B4J1Y9 119 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 A0A1W2PRX2 142 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 FAM90A10PA6NDY2 464 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 FAM90A7PA6NKC0 464 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 FAM90A23PA8MXZ1 464 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 C12orf77C9JDV5 145 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 G3V4G9 280 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 HSD17B6O14756 317 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 ORC5O43913 435 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 PDCD6O75340 191 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 SC5DO75845 299 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 MPIG6BO95866 241 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 HBZP02008 142 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 OPN1MWP04001 364 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 UCHL1P09936 223 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 OPN1MW2P0DN77 364 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 OPN1MW3P0DN78 364 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms