RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 OR10G4Q8NGN3 311 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 OR10G9Q8NGN4 311 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 OR10G7Q8NGN6 311 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 UCN2Q96RP3 112 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 LRRC61Q9BV99 259 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 OPN3Q9H1Y3 402 aaPredicted RBP9.47□□□□□ -0.89
PALB2-206ENST00000568219 SPTY2D1-AS1A0A0U1RR47 76 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 PITX3O75364 302 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 GCGP01275 180 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 RAC2P15153 192 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 HNRNPA3P51991 378 aaKnown RBP9.47□□□□□ -0.89
PALB2-206ENST00000568219 SLC38A11Q08AI6 406 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 TRIM61Q5EBN2 209 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 TMEM92Q6UXU6 159 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 CALHM1Q8IU99 346 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 FAM58AQ8N1B3 248 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 SGMS2Q8NHU3 365 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 ZNF721Q8TF20 911 aa9.47□□□□□ -0.89
PALB2-206ENST00000568219 MRPL37Q9BZE1 423 aaKnown RBP9.47□□□□□ -0.89
PALB2-206ENST00000568219 KIR2DS1A0A191URI9 304 aa9.46□□□□□ -0.89
PALB2-206ENST00000568219 FCN1O00602 326 aa9.46□□□□□ -0.89
PALB2-206ENST00000568219 OR10J1P30954 320 aa9.46□□□□□ -0.89
PALB2-206ENST00000568219 KIR2DS4P43632 304 aa9.46□□□□□ -0.89
PALB2-206ENST00000568219 TPPP2P59282 170 aa9.46□□□□□ -0.89
PALB2-206ENST00000568219 PLP2Q04941 152 aa9.46□□□□□ -0.89
PALB2-206ENST00000568219 KIR2DS1Q14954 304 aa9.46□□□□□ -0.89
PALB2-206ENST00000568219 MRGPRGQ86SM5 289 aa9.46□□□□□ -0.89
PALB2-206ENST00000568219 OR10S1Q8NGN2 331 aa9.46□□□□□ -0.89
PALB2-206ENST00000568219 BORCS7Q96B45 105 aa9.46□□□□□ -0.89
PALB2-206ENST00000568219 ZNF385AQ96PM9 386 aaKnown RBP9.46□□□□□ -0.89
PALB2-206ENST00000568219 CIB3Q96Q77 187 aaPredicted RBP9.46□□□□□ -0.89
PALB2-206ENST00000568219 ACTR3CQ9C0K3 210 aaPredicted RBP9.46□□□□□ -0.89
PALB2-206ENST00000568219 PLEKHA3Q9HB20 300 aa9.46□□□□□ -0.89
PALB2-206ENST00000568219 GPR27Q9NS67 375 aa9.46□□□□□ -0.89
PALB2-206ENST00000568219 RALGAPA1Q6GYQ0 2036 aa9.46□□□□□ -0.89
PALB2-206ENST00000568219 A0A1B0GX78 115 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 LOC390937A0A1W2PQ73 354 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 F6UZH7 168 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 SYNGR2O43760 224 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 AMTP48728 403 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 SUCLG1P53597 346 aaKnown RBP9.46□□□□□ -0.9
PALB2-206ENST00000568219 OR10P1Q8NGE3 313 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 OR1L3Q8NH93 324 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 CLDND2Q8NHS1 167 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 TMEM9BQ9NQ34 198 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 ZNF586Q9NXT0 402 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 TUBD1Q9UJT1 453 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 CACNA1GO43497 2377 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 GYPAP02724 150 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 PSG2P11465 335 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 CEACAM1P13688 526 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 CRISP2P16562 243 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 CCKARP32238 428 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 TNFRSF4P43489 277 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 TCL1AP56279 114 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 TMEM183BQ1AE95 376 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 SNAI3Q3KNW1 292 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 ERASQ7Z444 233 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 C1QL4Q86Z23 238 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 H1FOOQ8IZA3 346 aaPredicted RBP9.46□□□□□ -0.9
PALB2-206ENST00000568219 ST6GALNAC3Q8NDV1 305 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 OR4C5Q8NGB2 326 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 OR6C1Q96RD1 312 aa9.46□□□□□ -0.9
PALB2-206ENST00000568219 CHD3Q12873 2000 aaKnown RBP9.45□□□□□ -0.9
PALB2-206ENST00000568219 IFITM10A6NMD0 228 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 SLC25A6P12236 298 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 CD38P28907 300 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 MEF2BQ02080 365 aaPredicted RBP9.45□□□□□ -0.9
PALB2-206ENST00000568219 ZNF506Q5JVG8 444 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 LHFPL1Q86WI0 220 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 FLVCR1-AS1Q8TAF5 88 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 GPBAR1Q8TDU6 330 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 TMEM171Q8WVE6 324 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 TMEM222Q9H0R3 208 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 VSIRQ9H7M9 311 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 DUXBA0A1W2PPF3 345 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 TNFSF11O14788 317 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 HPRT1P00492 218 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 HOXC4P09017 264 aaPredicted RBP9.45□□□□□ -0.9
PALB2-206ENST00000568219 ZNF32P17041 273 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 COX5AP20674 150 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 ARSJQ5FYB0 599 aaPredicted RBP9.45□□□□□ -0.9
PALB2-206ENST00000568219 ATOH7Q8N100 152 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 OR10V1Q8NGI7 309 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 ADIPOR1Q96A54 375 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 SPSB1Q96BD6 273 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 CTDSP1Q9GZU7 261 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 GLRX2Q9NS18 164 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 LYRM2Q9NU23 88 aaPredicted RBP9.45□□□□□ -0.9
PALB2-206ENST00000568219 FOXJ2Q9P0K8 574 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 CD207Q9UJ71 328 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 TP53TG5Q9Y2B4 290 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 A8MWP6 167 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 C11orf94C9JXX5 98 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 LHFPL2Q6ZUX7 228 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 OR5D13Q8NGL4 314 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 IFI44Q8TCB0 444 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 MRGPRX4Q96LA9 322 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 SRD5A3Q9H8P0 318 aa9.45□□□□□ -0.9
PALB2-206ENST00000568219 KCNIP1Q9NZI2 227 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms