RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 DDI2Q5TDH0 399 aa11.33□□□□□ -0.6
COMMD4-216ENST00000567023 OR8H3Q8N146 312 aa11.33□□□□□ -0.6
COMMD4-216ENST00000567023 STX19Q8N4C7 294 aa11.33□□□□□ -0.6
COMMD4-216ENST00000567023 MRGPRDQ8TDS7 321 aa11.33□□□□□ -0.6
COMMD4-216ENST00000567023 TOMM40LQ969M1 308 aa11.33□□□□□ -0.6
COMMD4-216ENST00000567023 ZNF581Q9P0T4 197 aa11.33□□□□□ -0.6
COMMD4-216ENST00000567023 ING4Q9UNL4 249 aa11.33□□□□□ -0.6
COMMD4-216ENST00000567023 A0A1W2PPI3 338 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 GEMIN2O14893 280 aaKnown RBP11.32□□□□□ -0.6
COMMD4-216ENST00000567023 OR7C1O76099 320 aaPredicted RBP11.32□□□□□ -0.6
COMMD4-216ENST00000567023 SSTR5P35346 364 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 VHLP40337 213 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 SLC35A2P78381 396 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 DOC2BQ14184 412 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 Q6ZPA2 131 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 NANOGP1Q8N7R0 232 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 OR4X2Q8NGF9 303 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 OR52M1Q8NGK5 317 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 RFESDQ8TAC1 157 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 LEAP2Q969E1 77 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 PGLYRP3Q96LB9 341 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 DUSP21Q9H596 190 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 NECAP2Q9NVZ3 263 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 RAB26Q9ULW5 256 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 MOB4Q9Y3A3 225 aa11.32□□□□□ -0.6
COMMD4-216ENST00000567023 TCRBV4S1A1TA0A5B7 111 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 C15orf65H3BRN8 121 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 IGHV3-7P01780 117 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 SNRNP70P08621 437 aaKnown RBP11.31□□□□□ -0.6
COMMD4-216ENST00000567023 GTF2F2P13984 249 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 FSTP19883 344 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 WNT4P56705 351 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 TAS2R43P59537 309 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 EBI3Q14213 229 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 DIAPH2-AS1Q14236 149 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 GPR176Q14439 515 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 Q499Y3 187 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 CDH26Q8IXH8 852 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 DRAM1Q8N682 238 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 C8orf31Q8N9H6 132 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 OR56B4Q8NH76 319 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 MYDGFQ969H8 173 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 PHF21AQ96BD5 680 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 MRPS24Q96EL2 167 aaKnown RBP11.31□□□□□ -0.6
COMMD4-216ENST00000567023 S100A13Q99584 98 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 ZNF184Q99676 751 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-216ENST00000567023 SCN3BQ9NY72 215 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 CKLFQ9UBR5 152 aa11.31□□□□□ -0.6
COMMD4-216ENST00000567023 RRP15Q9Y3B9 282 aaKnown RBP11.31□□□□□ -0.6
COMMD4-216ENST00000567023 TRBV5-7A0A0A0MS05 114 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 A0A1W2PRX2 142 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 TMEM30CPA0ZSE6 113 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 SH2D7A6NKC9 451 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-216ENST00000567023 PTGES3LE9PB15 166 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 MYL12BO14950 172 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 FGF16O43320 207 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 ORC5O43913 435 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 PRB2P02812 416 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-216ENST00000567023 MT-ND4P03905 459 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 CD1AP06126 327 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 PF4V1P10720 104 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 CD33P20138 364 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 SERPINA2P20848 420 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 ZNF816Q0VGE8 651 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-216ENST00000567023 IRF3Q14653 427 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 LTC4SQ16873 150 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 SLC22A6Q4U2R8 563 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 C10orf99Q6UWK7 81 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 ZNF497Q6ZNH5 498 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 LINC00311Q8N616 119 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 C5orf56Q8N8D9 126 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 OR13C5Q8NGS8 318 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 OR10X1Q8NGY0 326 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 SGCDQ92629 289 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 ORAI1Q96D31 301 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 SPACA1Q9HBV2 294 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 ERGIC3Q9Y282 383 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 LSM2Q9Y333 95 aaKnown RBP11.3□□□□□ -0.6
COMMD4-216ENST00000567023 TPRKBQ9Y3C4 175 aa11.3□□□□□ -0.6
COMMD4-216ENST00000567023 TRAV8-7A0A075B6U6 113 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 TRAV39A0A0B4J263 110 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 A0A1W2PP11 408 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 MAGEA13PA6NCF6 341 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 CRHBPP24387 322 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 GNG10P50151 68 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 LOXL3P58215 753 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 Q3ZCU0 254 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 FOXB2Q5VYV0 432 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 LYPD6Q86Y78 171 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 GAPTQ8N292 157 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 ZFP41Q8N8Y5 198 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 ARL11Q969Q4 196 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 ST6GALNAC6Q969X2 333 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 MND1Q9BWT6 205 aa11.29□□□□□ -0.6
COMMD4-216ENST00000567023 RCC2Q9P258 522 aaKnown RBP11.29□□□□□ -0.6
COMMD4-216ENST00000567023 PSMB11A5LHX3 300 aa11.28□□□□□ -0.6
COMMD4-216ENST00000567023 HSD17B6O14756 317 aa11.28□□□□□ -0.6
COMMD4-216ENST00000567023 IGHG2P01859 326 aa11.28□□□□□ -0.6
COMMD4-216ENST00000567023 GAPDHP04406 335 aaKnown RBP11.28□□□□□ -0.6
COMMD4-216ENST00000567023 IGLL1P15814 213 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms