RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 DUSP18Q8NEJ0 188 aa6.56□□□□□ -1.36
TCF4-216ENST00000562680 OR5AP2Q8NGF4 316 aa6.56□□□□□ -1.36
TCF4-216ENST00000562680 RTN4IP1Q8WWV3 396 aaPredicted RBP6.56□□□□□ -1.36
TCF4-216ENST00000562680 CHODLQ9H9P2 273 aa6.56□□□□□ -1.36
TCF4-216ENST00000562680 OSGIN2Q9Y236 505 aa6.56□□□□□ -1.36
TCF4-216ENST00000562680 SS18L1O75177 396 aaPredicted RBP6.55□□□□□ -1.36
TCF4-216ENST00000562680 TUSC2O75896 110 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 NFYBP25208 207 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 ZNF266Q14584 549 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 HAGHQ16775 308 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 PHLDA2Q53GA4 152 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 RBMS3Q6XE24 437 aaKnown RBP6.55□□□□□ -1.36
TCF4-216ENST00000562680 TRMT61AQ96FX7 289 aaKnown RBP6.55□□□□□ -1.36
TCF4-216ENST00000562680 PACRGQ96M98 296 aaPredicted RBP6.55□□□□□ -1.36
TCF4-216ENST00000562680 RNF2Q99496 336 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 PECRQ9BY49 303 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 G6PC2Q9NQR9 355 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 CEP250Q9BV73 2442 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 VSIG8P0DPA2 414 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 CCL2P13500 99 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 SUCLG1P53597 346 aaKnown RBP6.55□□□□□ -1.36
TCF4-216ENST00000562680 RAB11AP62491 216 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 LTC4SQ16873 150 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 GPR157Q5UAW9 335 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 KLHDC1Q8N7A1 406 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 RPS4Y2Q8TD47 263 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 ABHD17AQ96GS6 310 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 A0A0G2JMM0 328 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 A0A1W2PPB8 328 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 A0A1W2PRS3 328 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 KIR3DP1A8MWS1 328 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 ZBTB25P24278 435 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 PTGDSP41222 190 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 UBE2G2P60604 165 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 ENDOGQ14249 297 aaKnown RBP6.55□□□□□ -1.36
TCF4-216ENST00000562680 OR51A4Q8NGJ6 313 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 ERGIC1Q969X5 290 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 DEPPQ9NTK1 212 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 MED9Q9NWA0 146 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 PLXNB3Q9ULL4 1909 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 A0A1B0GW15 77 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 TMEM8BA6NDV4 472 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 H3BMH7 237 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 ASCL1P50553 236 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 LINC00303Q3SY05 128 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 SCCPDHQ8NBX0 429 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 ADTRPQ96IZ2 230 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 CIB3Q96Q77 187 aaPredicted RBP6.55□□□□□ -1.36
TCF4-216ENST00000562680 ABHD1Q96SE0 405 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 UBTD1Q9HAC8 227 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 DNAJC4Q9NNZ3 241 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 V9GYH0 126 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 ZNF106Q9H2Y7 1883 aaKnown RBP6.55□□□□□ -1.36
TCF4-216ENST00000562680 A0A1B0GV50 99 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 C17orf51A8MQB3 221 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 TAAR5O14804 337 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 GZMHP20718 246 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 MST1P26927 711 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 NKX2-1P43699 371 aaPredicted RBP6.55□□□□□ -1.36
TCF4-216ENST00000562680 TMEM183BQ1AE95 376 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 MRGPRGQ86SM5 289 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 MARCH1Q8TCQ1 289 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 MARVELD1Q9BSK0 173 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 PLEKHA2Q9HB19 425 aa6.55□□□□□ -1.36
TCF4-216ENST00000562680 APC2O95996 2303 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 A6NJY4 79 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 RPL36A-HNRNPH2H7BZ11 118 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 SDCBPO00560 298 aaPredicted RBP6.54□□□□□ -1.36
TCF4-216ENST00000562680 OR2F2O95006 317 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 EFNB1P98172 346 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 OR2F1Q13607 317 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 GLDNQ6ZMI3 551 aaPredicted RBP6.54□□□□□ -1.36
TCF4-216ENST00000562680 H2BFWTQ7Z2G1 175 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 RFLNBQ8N5W9 214 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 EIF4E3Q8N5X7 224 aaKnown RBP6.54□□□□□ -1.36
TCF4-216ENST00000562680 OR2J1Q9GZK6 312 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 ZDHHC8Q9ULC8 765 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 NPTNQ9Y639 398 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 ALPK2Q86TB3 2170 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 C5orf52A6NGY3 159 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 ZNF716A6NP11 495 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 CDRT15L2A8MXV6 281 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 IL18BPO95998 194 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 DLK1P80370 383 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 CXorf58Q96LI9 332 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 VAMP8Q9BV40 100 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 SAMD10Q9BYL1 202 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 SAP30LQ9HAJ7 183 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 ANXA10Q9UJ72 324 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 CELA3AP09093 270 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 SNRPNP63162 240 aaKnown RBP6.54□□□□□ -1.36
TCF4-216ENST00000562680 GUCA2AQ02747 115 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 RPUSD3Q6P087 351 aaKnown RBP6.54□□□□□ -1.36
TCF4-216ENST00000562680 C2orf50Q96LR7 162 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 NDUFAF3Q9BU61 184 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 RTN4RQ9BZR6 473 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 LIPGQ9Y5X9 500 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 HSD17B6O14756 317 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 CST4P01036 141 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 KIR2DS2P43631 304 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms