RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 VSTM5A8MXK1 200 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 DEFB108AA8MXU0 73 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.3□□□□□ -1.4
TPM1-231ENST00000561395 IFNL4K9M1U5 179 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 SDCBPO00560 298 aaPredicted RBP6.3□□□□□ -1.4
TPM1-231ENST00000561395 SSNA1O43805 119 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 CREBL2O60519 120 aaPredicted RBP6.3□□□□□ -1.4
TPM1-231ENST00000561395 LHBP01229 141 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 EGR1P18146 543 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 FPR2P25090 351 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 SERPINF1P36955 418 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 CEBPDP49716 269 aaPredicted RBP6.3□□□□□ -1.4
TPM1-231ENST00000561395 NPY4RP50391 375 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 TSPAN5P62079 268 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 HOXA4Q00056 320 aaPredicted RBP6.3□□□□□ -1.4
TPM1-231ENST00000561395 FCN2Q15485 313 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 EFNB3Q15768 340 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 AADACL3Q5VUY0 350 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 ZNF626Q68DY1 528 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 ZNF660Q6AZW8 331 aaPredicted RBP6.3□□□□□ -1.4
TPM1-231ENST00000561395 ZNF497Q6ZNH5 498 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 MOB1BQ7L9L4 216 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 PEG10Q86TG7 708 aaKnown RBP6.3□□□□□ -1.4
TPM1-231ENST00000561395 SLC25A42Q86VD7 318 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 LRRC75A-AS1Q8N1F1 130 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 GAPTQ8N292 157 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 GCSAMQ8N6F7 178 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 OR52B4Q8NGK2 314 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 PLPPR1Q8TBJ4 325 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 MRPL30Q8TCC3 161 aaKnown RBP6.3□□□□□ -1.4
TPM1-231ENST00000561395 Q8TCH9 128 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 MARCH1Q8TCQ1 289 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 NEUROG1Q92886 237 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 ERGIC1Q969X5 290 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 DACT3Q96B18 629 aaPredicted RBP6.3□□□□□ -1.4
TPM1-231ENST00000561395 TMEM204Q9BSN7 226 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 SEBOXQ9HB31 216 aaPredicted RBP6.3□□□□□ -1.4
TPM1-231ENST00000561395 TMEM165Q9HC07 324 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 GPN1Q9HCN4 374 aaPredicted RBP6.3□□□□□ -1.4
TPM1-231ENST00000561395 GCM1Q9NP62 436 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 OR14J1Q9UGF5 321 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 WIPI2Q9Y4P8 454 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 NPTNQ9Y639 398 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 DYSFO75923 2080 aa6.3□□□□□ -1.4
TPM1-231ENST00000561395 KIR2DS1A0A191URI9 304 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 OR5H14A6NHG9 310 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 TRDCB7Z8K6 153 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 B9A039 149 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 M0R233 179 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 FABP7O15540 132 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 PSPNO60542 156 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 PLAUP00749 431 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 OR4E1P0C645 316 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 GSTT2P0CG29 244 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 SULT1A3P0DMM9 295 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 SULT1A4P0DMN0 295 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 OR5H8P0DN80 308 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 PSG2P11465 335 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 LMO1P25800 156 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 APOBEC3AP31941 199 aaPredicted RBP6.29□□□□□ -1.4
TPM1-231ENST00000561395 ECI1P42126 302 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 KIR2DS4P43632 304 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 SMCPP49901 116 aaPredicted RBP6.29□□□□□ -1.4
TPM1-231ENST00000561395 UBE2MP61081 183 aaKnown RBP6.29□□□□□ -1.4
TPM1-231ENST00000561395 HLA-DRB3P79483 266 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 CD83Q01151 205 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 KIR2DS1Q14954 304 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 ATXN7L3Q14CW9 347 aaPredicted RBP6.29□□□□□ -1.4
TPM1-231ENST00000561395 SURF2Q15527 256 aaPredicted RBP6.29□□□□□ -1.4
TPM1-231ENST00000561395 MST1LQ2TV78 715 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 ZNF672Q499Z4 452 aaPredicted RBP6.29□□□□□ -1.4
TPM1-231ENST00000561395 C4orf46Q504U0 113 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 FAM209AQ5JX71 171 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 FAHD2BQ6P2I3 314 aaPredicted RBP6.29□□□□□ -1.4
TPM1-231ENST00000561395 PRSS57Q6UWY2 283 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 C20orf204Q6ZNR8 217 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 C17orf107Q6ZR85 190 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 TMED4Q7Z7H5 227 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 TCTE3Q8IZS6 198 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 OR11H7Q8NGC8 314 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 LILRB1Q8NHL6 650 aaPredicted RBP6.29□□□□□ -1.4
TPM1-231ENST00000561395 ZNF431Q8TF32 576 aaPredicted RBP6.29□□□□□ -1.4
TPM1-231ENST00000561395 CAPSLQ8WWF8 208 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 FAHD2AQ96GK7 314 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 SCGB3A2Q96PL1 93 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 FYTTD1Q96QD9 318 aaKnown RBP6.29□□□□□ -1.4
TPM1-231ENST00000561395 ZNF2Q9BSG1 426 aaPredicted RBP6.29□□□□□ -1.4
TPM1-231ENST00000561395 FXYD6Q9H0Q3 95 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 RANGRFQ9HD47 186 aaPredicted RBP6.29□□□□□ -1.4
TPM1-231ENST00000561395 RNF7Q9UBF6 113 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 ZNF69Q9UC07 566 aa6.29□□□□□ -1.4
TPM1-231ENST00000561395 YLPM1P49750 1951 aaKnown RBP6.29□□□□□ -1.4
TPM1-231ENST00000561395 USF3Q68DE3 2245 aa6.28□□□□□ -1.4
TPM1-231ENST00000561395 IGKV1D-17A0A075B6S4 117 aa6.28□□□□□ -1.4
TPM1-231ENST00000561395 TMEM30CPA0ZSE6 113 aa6.28□□□□□ -1.4
TPM1-231ENST00000561395 RFPL4AA6NLU0 287 aa6.28□□□□□ -1.4
TPM1-231ENST00000561395 RFPL4AL1F8VTS6 287 aa6.28□□□□□ -1.4
TPM1-231ENST00000561395 LCE2BO14633 110 aa6.28□□□□□ -1.4
TPM1-231ENST00000561395 TFF1P04155 84 aa6.28□□□□□ -1.4
TPM1-231ENST00000561395 TNFRSF1AP19438 455 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms