RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-208	ENST00000561271	TFAP2C	Q92754	450 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	RBM14	Q96PK6	669 aa	Known RBP	13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	OCSTAMP	Q9BR26	566 aa		13.73	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	AMY1A	P04745	511 aa		13.72	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	AMY2A	P04746	511 aa		13.72	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	LPL	P06858	475 aa		13.72	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	SNRNP70	P08621	437 aa	Known RBP	13.72	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	MADCAM1	Q13477	382 aa		13.72	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	INSL4	Q14641	139 aa		13.72	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	NDUFA11	Q86Y39	141 aa		13.72	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	CYYR1	Q96J86	154 aa		13.72	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	BANF2	Q9H503	90 aa		13.72	□□□□□ -0.21
CDC42BPB-208	ENST00000561271		G3V4G9	280 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	C15orf65	H3BRN8	121 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	AIP	O00170	330 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	CDK1	P06493	297 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	AQP4	P55087	323 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	GPR176	Q14439	515 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	C9orf152	Q5JTZ5	239 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	DRAM1	Q8N682	238 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	OR10A7	Q8NGE5	316 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	OR10X1	Q8NGY0	326 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	SGCD	Q92629	289 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	DCLRE1B	Q9H816	532 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	PCDHB16	Q9NRJ7	776 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	RCC2	Q9P258	522 aa	Known RBP	13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	ERGIC3	Q9Y282	383 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	MOB4	Q9Y3A3	225 aa		13.71	□□□□□ -0.21
CDC42BPB-208	ENST00000561271	IGHV3-43	A0A0B4J1X8	118 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271		A0A1W2PRX2	142 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	SDCBP	O00560	298 aa	Predicted RBP	13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	CD1A	P06126	327 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	IGHV3-43D	P0DP04	118 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	MGMT	P16455	207 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	MAPK3	P27361	379 aa	Predicted RBP	13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	VHL	P40337	213 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM27D1	Q5T7N8	215 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	RAB12	Q6IQ22	244 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	ZNF497	Q6ZNH5	498 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	LYPD6	Q86Y78	171 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	NKAIN3	Q8N8D7	197 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	TMEM104	Q8NE00	496 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	OR5AU1	Q8NGC0	362 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	NRG4	Q8WWG1	115 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	ARL11	Q969Q4	196 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM46B	Q96A09	425 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	R3HDM4	Q96D70	268 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	MND1	Q9BWT6	205 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	SELENOI	Q9C0D9	397 aa		13.7	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	PTGES3L	E9PB15	166 aa		13.69	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	HSD17B6	O14756	317 aa		13.69	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	CRTAP	O75718	401 aa	Predicted RBP	13.69	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	MT-ND4	P03905	459 aa		13.69	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	REG1B	P48304	166 aa		13.69	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	GABPB1	Q06547	395 aa	Predicted RBP	13.69	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	HES1	Q14469	280 aa		13.69	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	C10orf99	Q6UWK7	81 aa		13.69	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	THRSP	Q92748	146 aa		13.69	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	TMED9	Q9BVK6	235 aa		13.69	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	SPACA1	Q9HBV2	294 aa		13.69	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	ETAA1	Q9NY74	926 aa		13.69	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	LSM2	Q9Y333	95 aa	Known RBP	13.69	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM90A18P	A6NE21	464 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM90A16P	A6NEW6	464 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM90A20P	A6NIJ5	464 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM90A9P	A6NNJ1	464 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM90A12P	A8MX19	464 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM90A5P	A8MXJ8	464 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	C12orf77	C9JDV5	145 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	MCRIP1	C9JLW8	97 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM90A15P	P0C7V4	464 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM90A13P	P0C7W8	464 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM90A14P	P0C7W9	464 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM90A24P	P0C7X0	464 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	FAM106CP	P0CH98	169 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	TMEM11	P17152	192 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	GZMH	P20718	246 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	RAB7A	P51149	207 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	LOXL3	P58215	753 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	EMX1	Q04741	257 aa	Predicted RBP	13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	BEAN1	Q3B7T3	259 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	TCTEX1D4	Q5JR98	221 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	RBM48	Q5RL73	367 aa	Known RBP	13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	C6orf141	Q5SZD1	244 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	SAMD5	Q5TGI4	173 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	SLC16A12	Q6ZSM3	486 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	CDH26	Q8IXH8	852 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	OR8H3	Q8N146	312 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	OR4F17	Q8NGA8	305 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	OR4K15	Q8NH41	348 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	MRPS24	Q96EL2	167 aa	Known RBP	13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271		Q96M66	194 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	OR4F4	Q96R69	305 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	GFOD1	Q9NXC2	390 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	PEX16	Q9Y5Y5	336 aa		13.68	□□□□□ -0.22
CDC42BPB-208	ENST00000561271		M0QZK8	103 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	ORC5	O43913	435 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	IGKV1D-33	P01593	117 aa		13.67	□□□□□ -0.22
CDC42BPB-208	ENST00000561271	IGKV1-33	P01594	117 aa		13.67	□□□□□ -0.22

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