RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 SHBQ15464 509 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 ZNF385AQ96PM9 386 aaKnown RBP14.18□□□□□ -0.14
TPM1-228ENST00000560975 RNF115Q9Y4L5 304 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 WDFY3Q8IZQ1 3526 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 TRBV11-1A0A0K0K1C0 115 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 A0A1W2PR80 420 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 MAP1LC3B2A6NCE7 125 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 LINC01565O15544 149 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 GALR2O43603 387 aaPredicted RBP14.17□□□□□ -0.14
TPM1-228ENST00000560975 ZNF737O75373 536 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 TCN2P20062 427 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 WNT5AP41221 380 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 COA6Q5JTJ3 125 aaKnown RBP14.17□□□□□ -0.14
TPM1-228ENST00000560975 SPTSSAQ969W0 71 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 CFHR5Q9BXR6 569 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 MAP1LC3BQ9GZQ8 125 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 FKBP11Q9NYL4 201 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 EYSQ5T1H1 3165 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 HOXA6P31267 233 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 CNN3Q15417 329 aaKnown RBP14.17□□□□□ -0.14
TPM1-228ENST00000560975 TMEM170AQ8WVE7 144 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 TMEM208Q9BTX3 173 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 TMEM106CQ9BVX2 250 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 MYOTQ9UBF9 498 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 POLR3KQ9Y2Y1 108 aaPredicted RBP14.17□□□□□ -0.14
TPM1-228ENST00000560975 GOLT1BQ9Y3E0 138 aa14.17□□□□□ -0.14
TPM1-228ENST00000560975 PATE4P0C8F1 98 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 RPL23P62829 140 aaKnown RBP14.16□□□□□ -0.14
TPM1-228ENST00000560975 ARL16Q0P5N6 197 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 WDR5BQ86VZ2 330 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 ZNF705FA8MVS1 300 aaPredicted RBP14.16□□□□□ -0.14
TPM1-228ENST00000560975 B4E171 279 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 NRASP01111 189 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 ZNF705DP0CH99 300 aaPredicted RBP14.16□□□□□ -0.14
TPM1-228ENST00000560975 ZNF705BP0CI00 300 aaPredicted RBP14.16□□□□□ -0.14
TPM1-228ENST00000560975 MDH2P40926 338 aaKnown RBP14.16□□□□□ -0.14
TPM1-228ENST00000560975 TSPAN7P41732 249 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 NPBWR2P48146 333 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 OR1D5P58170 312 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 MRGPRGQ86SM5 289 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 ZNF295-AS1Q8N0V1 137 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 RLN3Q8WXF3 142 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 NABP1Q96AH0 204 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 ACY3Q96HD9 319 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 PYGO2Q9BRQ0 406 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 KIAA0895LQ68EN5 471 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 OR51H1Q8NH63 302 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 MBD3L1Q8WWY6 194 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 LHX4Q969G2 390 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 P2RX4Q99571 388 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 CRISPLD2Q9H0B8 497 aa14.16□□□□□ -0.14
TPM1-228ENST00000560975 ZNF407Q9C0G0 2248 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 SLC22A20A6NK97 555 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 AQP7P3A6NL99 342 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 CST2P09228 141 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 CD33P20138 364 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 PRAMEF20Q5VT98 475 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 ZNF774Q6NX45 483 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 PIGCQ92535 297 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 PPP1R14DQ9NXH3 145 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 PTRH2Q9Y3E5 179 aaKnown RBP14.15□□□□□ -0.14
TPM1-228ENST00000560975 PIAS3Q9Y6X2 628 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 LILRA5A6NI73 299 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 IFNA1P01562 189 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 OTX1P32242 354 aaPredicted RBP14.15□□□□□ -0.14
TPM1-228ENST00000560975 TMEM211Q6ICI0 200 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 CYP2G1PQ6ZSU1 146 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 ADPRHL1Q8NDY3 354 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 GPR146Q96CH1 333 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 ABHD14BQ96IU4 210 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 HIPK2Q9H2X6 1198 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 SEMA5BQ9P283 1151 aa14.15□□□□□ -0.14
TPM1-228ENST00000560975 DHHO43323 396 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 RAB4AP20338 218 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 UCP1P25874 307 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 PDLIM4P50479 330 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 FAM3BP58499 235 aaPredicted RBP14.14□□□□□ -0.15
TPM1-228ENST00000560975 PLCXD3Q63HM9 321 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 LHFPL2Q6ZUX7 228 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 GATAD1Q8WUU5 269 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 EXTL1Q92935 676 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 C10orf35Q96D05 121 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 UCN2Q96RP3 112 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 OR51I2Q9H344 312 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 COL5A1P20908 1838 aaPredicted RBP14.14□□□□□ -0.15
TPM1-228ENST00000560975 A0A1B0GX78 115 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 DLEU1O43261 78 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 HRASP01112 189 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 MYF5P13349 255 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 RBM11P57052 281 aaKnown RBP14.14□□□□□ -0.15
TPM1-228ENST00000560975 SHHQ15465 462 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 BATFQ16520 125 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 CST9LP1Q5W188 147 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 CALHM1Q8IU99 346 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 TGIF2LYQ8IUE0 185 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 TMEM256Q8N2U0 113 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 SLC39A9Q9NUM3 307 aa14.14□□□□□ -0.15
TPM1-228ENST00000560975 PTGDSP41222 190 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 MEF2BQ02080 365 aaPredicted RBP14.13□□□□□ -0.15
TPM1-228ENST00000560975 ACTL10Q5JWF8 245 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms