RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 FGFRL1Q8N441 504 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 RNASE6Q93091 150 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 COQ2Q96H96 371 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 OR2A7Q96R45 310 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 RANBP3Q9H6Z4 567 aaPredicted RBP9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 IFT22Q9H7X7 185 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 EPG5Q9HCE0 2579 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 NDRG3Q9UGV2 375 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 ERRFI1Q9UJM3 462 aaPredicted RBP9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 FBXO9Q9UK97 447 aaPredicted RBP9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 PPP1R3CQ9UQK1 317 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 WIPI2Q9Y4P8 454 aa9.12□□□□□ -0.95
SNRPA1-211ENST00000560433 AKAP6Q13023 2319 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 FXYD6-FXYD2A0A087WZ82 144 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 OR5AC1P0C628 307 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 SFTPCP11686 197 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 GNRHRP30968 328 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 SERPINF1P36955 418 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 OR3A1P47881 315 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 AP2S1P53680 142 aaPredicted RBP9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 HLA-DRB3P79483 266 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 ZNF818PQ6ZRF7 136 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 OR5M8Q8NGP6 311 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 ZFAND1Q8TCF1 268 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 RTN4IP1Q8WWV3 396 aaPredicted RBP9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 MOB3AQ96BX8 217 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 TAF9BQ9HBM6 251 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 KCNJ16Q9NPI9 418 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 CCL28Q9NRJ3 127 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 SLC2A9Q9NRM0 540 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 RASL12Q9NYN1 266 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 RAI1Q7Z5J4 1906 aaPredicted RBP9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 UTP20O75691 2785 aaKnown RBP9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 IGHV3-43A0A0B4J1X8 118 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 KIR2DS1A0A191URI9 304 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 C17orf100A8MU93 164 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 ARPC5O15511 151 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 IGHV3-7P01780 117 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 PRB1P04280 392 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 IGHV3-43DP0DP04 118 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 SSTR5P35346 364 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 KIR2DS4P43632 304 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 TAS2R31P59538 309 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 KIR2DS1Q14954 304 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 KRBOX4Q5JUW0 171 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 OR1L1Q8NH94 360 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 OR10J5Q8NHC4 309 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 PIK3IP1Q96FE7 263 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 SCGB3A2Q96PL1 93 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 CLEC4MQ9H2X3 399 aaPredicted RBP9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 RHOFQ9HBH0 211 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 NGBQ9NPG2 151 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 RDH8Q9NYR8 311 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 IL19Q9UHD0 177 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 GLS2Q9UI32 602 aa9.11□□□□□ -0.95
SNRPA1-211ENST00000560433 HSPA12AO43301 675 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 GYPAP02724 150 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 CTSDP07339 412 aaPredicted RBP9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 CD3EP07766 207 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 ACAA1P09110 424 aaPredicted RBP9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 LMO1P25800 156 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 MZT1Q08AG7 82 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 FAHD2BQ6P2I3 314 aaPredicted RBP9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 ZNF880Q6PDB4 577 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 SGPP2Q8IWX5 399 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 GAPTQ8N292 157 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 OR13A1Q8NGR1 328 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 LILRB1Q8NHL6 650 aaPredicted RBP9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 CCL17Q92583 94 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 FAHD2AQ96GK7 314 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 OR10C1Q96KK4 312 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 METTL8Q9H825 291 aaKnown RBP9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 DECR2Q9NUI1 292 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 CISD1Q9NZ45 108 aaKnown RBP9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 DBX1A6NMT0 343 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 DEFB108AA8MXU0 73 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 M0R233 179 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 LHBP01229 141 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 IFNA2P01563 188 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 OMGP23515 440 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 EDDM3BP56851 147 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 RAP2BP61225 183 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 FAM90A1Q86YD7 464 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 OR52L2PQ8NGH6 319 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 PPP1R1CQ8WVI7 109 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 SLC5A7Q9GZV3 580 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 RIMS4Q9H426 269 aaPredicted RBP9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 MAB21L2Q9Y586 359 aa9.1□□□□□ -0.95
SNRPA1-211ENST00000560433 CSMD2Q7Z408 3487 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 TRAV14DV4A0A0A6YYC5 116 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 CRYM-AS1A6NIL9 109 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 C12orf77C9JDV5 145 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 LYNX1G3V0Z9 82 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 PHF1O43189 567 aaPredicted RBP9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 DIRAS3O95661 229 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 LYNX1P0DP58 116 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 CXCL2P19875 107 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 CEACAM6P40199 344 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 GNMTQ14749 295 aa9.09□□□□□ -0.95
SNRPA1-211ENST00000560433 SURF2Q15527 256 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms