RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 PRTGQ2VWP7 1150 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 BSXQ3C1V8 233 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 WDR25Q64LD2 544 aaPredicted RBP5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 ARMC6Q6NXE6 501 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 TEX38Q6PEX7 206 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 KCNIP4Q6PIL6 250 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 ZNF66Q6ZN08 573 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 Q6ZS49 121 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 P4HA3Q7Z4N8 544 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 LYZL2Q7Z4W2 148 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 OOSP2Q86WS3 158 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 OR2D3Q8NGH3 330 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 OR51G1Q8NGK1 321 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 OR52M1Q8NGK5 317 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 GPR119Q8TDV5 335 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 NEK7Q8TDX7 302 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 DTD1Q8TEA8 209 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 DOK4Q8TEW6 326 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 NPRL2Q8WTW4 380 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 TMEM171Q8WVE6 324 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 KCNE4Q8WWG9 221 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 TMEM234Q8WY98 164 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 C11orf40Q8WZ69 217 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 ST8SIA1Q92185 356 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 GPER1Q99527 375 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 ATG101Q9BSB4 218 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 MAP1LC3BQ9GZQ8 125 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 OR51I2Q9H344 312 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 BANF2Q9H503 90 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 CALHM2Q9HA72 323 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 ZNF286AQ9HBT8 521 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 LPAR2Q9HBW0 351 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 ZDHHC4Q9NPG8 344 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 SLC2A9Q9NRM0 540 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 CENPMQ9NSP4 180 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 CBLN4Q9NTU7 201 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 TBC1D29Q9UFV1 150 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 NPIPA1Q9UND3 350 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 GAB2Q9UQC2 676 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 TIMM9Q9Y5J7 89 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 LRP4O75096 1905 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 NOTCH4Q99466 2003 aa5.12□□□□□ -1.59
SNRPA1-209ENST00000560307 TRAV39A0A0B4J263 110 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 LOC101059948A0A1B0GTJ6 334 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 OR6C6A6NF89 314 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 FAM24AA6NFZ4 105 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 K7EP13 123 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 HCRTR1O43613 425 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 PLRG1O43660 514 aaKnown RBP5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 DIRAS3O95661 229 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 SEMA4FO95754 770 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 UMODP07911 640 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 NPSP0C0P6 89 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 CD82P27701 267 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 CDKN1BP46527 198 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 DYNLT3P51808 116 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 ZNF41P51814 821 aaPredicted RBP5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 KLF3P57682 345 aaPredicted RBP5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 LOXL3P58215 753 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 HERV-K104P61576 105 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 SELENOTP62341 195 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 NFATC4Q14934 902 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 PDGFRLQ15198 375 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 KISS1Q15726 138 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 NKAIN1Q4KMZ8 207 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 TCEAL5Q5H9L2 206 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 ZNF776Q68DI1 518 aaPredicted RBP5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.11□□□□□ -1.597e-6■□□□□ 8.4
SNRPA1-209ENST00000560307 C16orf82Q7Z2V1 217 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 NUFIP2Q7Z417 695 aaKnown RBP5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 RTN4RL2Q86UN3 420 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 ZNF761Q86XN6 746 aaPredicted RBP5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 LINC00346Q8IVM7 164 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 GATSQ8NAP1 163 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 OR8B12Q8NGG6 310 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 OR10S1Q8NGN2 331 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 OR5C1Q8NGR4 320 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 OR2AJ1Q8NGZ0 328 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 OR2T10Q8NGZ9 312 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 OR51E1Q8TCB6 317 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 ORAOV1Q8WV07 137 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 C22orf15Q8WYQ4 148 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 SPSB1Q96BD6 273 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 NEIL1Q96FI4 390 aaPredicted RBP5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 GMPPAQ96IJ6 420 aaPredicted RBP5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 RAB40CQ96S21 281 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 FAAP24Q9BTP7 215 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 TMEM222Q9H0R3 208 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 RBKSQ9H477 322 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 MSL2Q9HCI7 577 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 FGF22Q9HCT0 170 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 MANBALQ9NQG1 85 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 ZNF701Q9NV72 531 aaPredicted RBP5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 AURKAIP1Q9NWT8 199 aaPredicted RBP5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 HCFC1R1Q9NWW0 138 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 FAM30AQ9NZY2 134 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 MCTS1Q9ULC4 181 aaKnown RBP5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 LAMP3Q9UQV4 416 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 FUT9Q9Y231 359 aa5.11□□□□□ -1.59
SNRPA1-209ENST00000560307 CLDN16Q9Y5I7 305 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms