RNA–Protein interactions for RNA: ENST00000560148.5

CCDC33-208, Transcript of coiled-coil domain containing 33, humanhuman

TSL 3

Gene CCDC33, Length 1,346 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-208ENST00000560148 C6orf141Q5SZD1 244 aa12.12□□□□□ -0.47
CCDC33-208ENST00000560148 RNLSQ5VYX0 342 aa12.12□□□□□ -0.47
CCDC33-208ENST00000560148 CCDC144NLQ6NUI1 221 aa12.12□□□□□ -0.47
CCDC33-208ENST00000560148 CDH26Q8IXH8 852 aa12.12□□□□□ -0.47
CCDC33-208ENST00000560148 OR10A7Q8NGE5 316 aa12.12□□□□□ -0.47
CCDC33-208ENST00000560148 TOMM40LQ969M1 308 aa12.12□□□□□ -0.47
CCDC33-208ENST00000560148 RPEQ96AT9 228 aa12.12□□□□□ -0.47
CCDC33-208ENST00000560148 AKR1E2Q96JD6 320 aa12.12□□□□□ -0.47
CCDC33-208ENST00000560148 RBM14Q96PK6 669 aaKnown RBP12.12□□□□□ -0.47
CCDC33-208ENST00000560148 MND1Q9BWT6 205 aa12.12□□□□□ -0.47
CCDC33-208ENST00000560148 PCDHB16Q9NRJ7 776 aa12.12□□□□□ -0.47
CCDC33-208ENST00000560148 LSM2Q9Y333 95 aaKnown RBP12.12□□□□□ -0.47
CCDC33-208ENST00000560148 AMMECR1Q9Y4X0 333 aaPredicted RBP12.12□□□□□ -0.47
CCDC33-208ENST00000560148 PRKDCP78527 4128 aaKnown RBP12.12□□□□□ -0.47
CCDC33-208ENST00000560148 A0A1W2PPI3 338 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 H3BUI4 141 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 MNDAP41218 407 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 ABCA11PQ4W5N1 156 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 PDLIM3Q53GG5 364 aaPredicted RBP12.11□□□□□ -0.47
CCDC33-208ENST00000560148 ARSJQ5FYB0 599 aaPredicted RBP12.11□□□□□ -0.47
CCDC33-208ENST00000560148 ZNF497Q6ZNH5 498 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 NKAIN3Q8N8D7 197 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 TMEM104Q8NE00 496 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 OR56B4Q8NH76 319 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 UBALD1Q8TB05 177 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 NEK7Q8TDX7 302 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 CCDC107Q8WV48 283 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 CYYR1Q96J86 154 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 ANKRD60Q9BZ19 345 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 BANF2Q9H503 90 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 A0A1W2PPE3 182 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 FAM90A18PA6NE21 464 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 FAM90A16PA6NEW6 464 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 FAM90A20PA6NIJ5 464 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 SH2D7A6NKC9 451 aaPredicted RBP12.11□□□□□ -0.47
CCDC33-208ENST00000560148 FAM90A9PA6NNJ1 464 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 ADARB2-AS1A8MUL3 147 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 FAM90A12PA8MX19 464 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 FAM90A5PA8MXJ8 464 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 PTGES3LE9PB15 166 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 PEX14O75381 377 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 MT-ND4P03905 459 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 OPN1MWP04001 364 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 FAM90A15PP0C7V4 464 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 FAM90A13PP0C7W8 464 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 FAM90A14PP0C7W9 464 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 FAM90A24PP0C7X0 464 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 OPN1MW2P0DN77 364 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 OPN1MW3P0DN78 364 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 MGMTP16455 207 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 MAPK3P27361 379 aaPredicted RBP12.11□□□□□ -0.47
CCDC33-208ENST00000560148 GP2P55259 537 aaKnown RBP12.11□□□□□ -0.47
CCDC33-208ENST00000560148 MADCAM1Q13477 382 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 NSUN5P1Q3KNT7 163 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 FAM27D1Q5T7N8 215 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 FAM53AQ6NSI3 398 aaPredicted RBP12.11□□□□□ -0.47
CCDC33-208ENST00000560148 SLC16A12Q6ZSM3 486 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 C1QL4Q86Z23 238 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 CAPSLQ8WWF8 208 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 THRSPQ92748 146 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 MRPS24Q96EL2 167 aaKnown RBP12.11□□□□□ -0.47
CCDC33-208ENST00000560148 CITED2Q99967 270 aaPredicted RBP12.11□□□□□ -0.47
CCDC33-208ENST00000560148 SPACA1Q9HBV2 294 aa12.11□□□□□ -0.47
CCDC33-208ENST00000560148 AIPO00170 330 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 CRTAPO75718 401 aaPredicted RBP12.1□□□□□ -0.47
CCDC33-208ENST00000560148 LPLP06858 475 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 SNRNP70P08621 437 aaKnown RBP12.1□□□□□ -0.47
CCDC33-208ENST00000560148 GZMHP20718 246 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 MYF6P23409 242 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 LOXL3P58215 753 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 SLC35A2P78381 396 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 IRF3Q14653 427 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 ACSM3Q53FZ2 586 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 RAB12Q6IQ22 244 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 NDUFA11Q86Y39 141 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 DRAM1Q8N682 238 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 OR10X1Q8NGY0 326 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 MYDGFQ969H8 173 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 ARL11Q969Q4 196 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 CNBD2Q96M20 576 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 Q96M66 194 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 UQCC2Q9BRT2 126 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 TMED9Q9BVK6 235 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 SELENOIQ9C0D9 397 aa12.1□□□□□ -0.47
CCDC33-208ENST00000560148 C12orf77C9JDV5 145 aa12.09□□□□□ -0.47
CCDC33-208ENST00000560148 MCRIP1C9JLW8 97 aa12.09□□□□□ -0.47
CCDC33-208ENST00000560148 SDCBPO00560 298 aaPredicted RBP12.09□□□□□ -0.47
CCDC33-208ENST00000560148 ORC5O43913 435 aa12.09□□□□□ -0.47
CCDC33-208ENST00000560148 FAM106CPP0CH98 169 aa12.09□□□□□ -0.47
CCDC33-208ENST00000560148 GPR50Q13585 617 aa12.09□□□□□ -0.47
CCDC33-208ENST00000560148 SPHARQ15513 63 aa12.09□□□□□ -0.47
CCDC33-208ENST00000560148 SIGIRRQ6IA17 410 aa12.09□□□□□ -0.47
CCDC33-208ENST00000560148 UNQ9370/PRO34162Q6UXP9 181 aa12.09□□□□□ -0.47
CCDC33-208ENST00000560148 LRRTM1Q86UE6 522 aa12.09□□□□□ -0.47
CCDC33-208ENST00000560148 GAPTQ8N292 157 aa12.09□□□□□ -0.47
CCDC33-208ENST00000560148 MS4A15Q8N5U1 240 aa12.09□□□□□ -0.47
CCDC33-208ENST00000560148 OR52M1Q8NGK5 317 aa12.09□□□□□ -0.47
CCDC33-208ENST00000560148 FAM46BQ96A09 425 aa12.09□□□□□ -0.47
CCDC33-208ENST00000560148 SCN3BQ9NY72 215 aa12.09□□□□□ -0.47
CCDC33-208ENST00000560148 ETAA1Q9NY74 926 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms