RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 NKX2-8O15522 239 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 PITX3O75364 302 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 FBXO24O75426 580 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 MED6O75586 246 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 IGKV3-15P01624 115 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 IGKV1-13P0DP09 117 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 SPP1P10451 314 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF44P15621 663 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 KITLGP21583 273 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 F2RP25116 425 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 CD200P41217 278 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 LPAR6P43657 344 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 IDH3GP51553 393 aaPredicted RBP6.87□□□□□ -1.31
SMAD3-212ENST00000559937 UCP2P55851 309 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 PMP22Q01453 160 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 OR8G1Q15617 311 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 HMGN3Q15651 99 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 MSMO1Q15800 293 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 SWI5Q1ZZU3 235 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 EIF2S3LQ2VIR3 472 aaKnown RBP6.87□□□□□ -1.31
SMAD3-212ENST00000559937 NMSQ5H8A3 153 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 MEX3BQ6ZN04 569 aaKnown RBP6.87□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF497Q6ZNH5 498 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 VASH2Q86V25 355 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 FAM219AQ8IW50 185 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 FAM169BQ8N8A8 192 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 FDCSPQ8NFU4 85 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 OR52M1Q8NGK5 317 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 LILRB1Q8NHL6 650 aaPredicted RBP6.87□□□□□ -1.31
SMAD3-212ENST00000559937 SNIP1Q8TAD8 396 aaKnown RBP6.87□□□□□ -1.31
SMAD3-212ENST00000559937 SLC25A40Q8TBP6 338 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 NARS2Q96I59 477 aaKnown RBP6.87□□□□□ -1.31
SMAD3-212ENST00000559937 TSNAXQ99598 290 aaKnown RBP6.87□□□□□ -1.31
SMAD3-212ENST00000559937 OR2J1Q9GZK6 312 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 HES4Q9HCC6 221 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 CCL28Q9NRJ3 127 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 PLSCR4Q9NRQ2 329 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 MBNL3Q9NUK0 354 aaKnown RBP6.87□□□□□ -1.31
SMAD3-212ENST00000559937 ZDHHC8Q9ULC8 765 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 WIPI2Q9Y4P8 454 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 DMXL2Q8TDJ6 3036 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 ASPMQ8IZT6 3477 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 A0A1B0GU03 582 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 SPAARA0A1B0GVQ0 90 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 A0A1B0GWJ7 208 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 TRIM77I1YAP6 450 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 DNASE2O00115 360 aaPredicted RBP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 SLC33A1O00400 549 aaPredicted RBP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 ABCD4O14678 606 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 PGLYRP1O75594 196 aaPredicted RBP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 RHBDL1O75783 438 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF205O95201 554 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 SNAPINO95295 136 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 OR2H2O95918 312 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 CD5P06127 495 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 CELA3BP08861 270 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 DANCRP0C864 163 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 RCC1P18754 421 aaPredicted RBP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 KIR2DL2P43627 348 aaPredicted RBP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 VAMP2P63027 116 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 DEFA5Q01523 94 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 EWSR1Q01844 656 aaKnown RBP eCLIP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 ID3Q02535 119 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 BAXQ07812 192 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 MZT1Q08AG7 82 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF154Q13106 437 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF266Q14584 549 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 P2RY6Q15077 328 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 C3orf36Q3SXR2 165 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 ACSF3Q4G176 576 aaPredicted RBP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 SPATA46Q5T0L3 261 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 Q6ZRG5 221 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 WDR86Q86TI4 376 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 MYPOPQ86VE0 399 aaPredicted RBP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 BATF2Q8N1L9 274 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 OR2C3Q8N628 320 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 WDR31Q8NA23 367 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 KDF1Q8NAX2 398 aaPredicted RBP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 LFNGQ8NES3 379 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 OR8G5Q8NG78 346 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 OR10V1Q8NGI7 309 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 OR1J1Q8NGS3 322 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 PRR7Q8TB68 274 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 RDH5Q92781 318 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 LSM10Q969L4 123 aaKnown RBP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 ERGIC1Q969X5 290 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF488Q96MN9 340 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 BCL2L14Q9BZR8 327 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 MS4A7Q9GZW8 240 aaPredicted RBP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 TOLLIPQ9H0E2 274 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 TLNRD1Q9H1K6 362 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 CXXC4Q9H2H0 198 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 OR51B6Q9H340 312 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 PLEKHF2Q9H8W4 249 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 SEBOXQ9HB31 216 aaPredicted RBP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 TREM1Q9NP99 234 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 LYRM2Q9NU23 88 aaPredicted RBP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 UQCC1Q9NVA1 299 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 LUZP4Q9P127 313 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms