RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 GPR132Q9UNW8 380 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 WIPI2Q9Y4P8 454 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 PPIAL4AQ9Y536 164 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 OOEPA6NGQ2 149 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 HSPB6O14558 160 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 PPIHO43447 177 aaKnown RBP13.79□□□□□ -0.2
TPM1-219ENST00000559397 SSNA1O43805 119 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 IGHV2-70P01814 119 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 OR4E1P0C645 316 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 OR5H8P0DN80 308 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 FPR2P25090 351 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 MDH2P40926 338 aaKnown RBP13.79□□□□□ -0.2
TPM1-219ENST00000559397 EIF2B2P49770 351 aaKnown RBP13.79□□□□□ -0.2
TPM1-219ENST00000559397 SMIM21Q3B7S5 101 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 PAN3Q58A45 887 aaKnown RBP13.79□□□□□ -0.2
TPM1-219ENST00000559397 FAHD2BQ6P2I3 314 aaPredicted RBP13.79□□□□□ -0.2
TPM1-219ENST00000559397 CLEC2AQ6UVW9 174 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 TMED4Q7Z7H5 227 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 FAM90A1Q86YD7 464 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 OR52B4Q8NGK2 314 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 C10orf105Q8TEF2 133 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 FAHD2AQ96GK7 314 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 SCGB3A2Q96PL1 93 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 FYTTD1Q96QD9 318 aaKnown RBP13.79□□□□□ -0.2
TPM1-219ENST00000559397 TMEM165Q9HC07 324 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 CHMP1AQ9HD42 196 aaPredicted RBP13.79□□□□□ -0.2
TPM1-219ENST00000559397 ING3Q9NXR8 418 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 GLS2Q9UI32 602 aa13.79□□□□□ -0.2
TPM1-219ENST00000559397 IGHV3OR15-7A0A075B7D8 119 aa13.78□□□□□ -0.2
TPM1-219ENST00000559397 OR5H14A6NHG9 310 aa13.78□□□□□ -0.2
TPM1-219ENST00000559397 LGALS8O00214 317 aa13.78□□□□□ -0.2
TPM1-219ENST00000559397 NDUFS8O00217 210 aa13.78□□□□□ -0.2
TPM1-219ENST00000559397 SIRPB1O00241 398 aa13.78□□□□□ -0.2
TPM1-219ENST00000559397 GSTT2P0CG29 244 aa13.78□□□□□ -0.2
TPM1-219ENST00000559397 CXCL3P19876 107 aa13.78□□□□□ -0.2
TPM1-219ENST00000559397 GPR6P46095 362 aaPredicted RBP13.78□□□□□ -0.2
TPM1-219ENST00000559397 DSCR9P59020 149 aa13.78□□□□□ -0.2
TPM1-219ENST00000559397 SURF2Q15527 256 aaPredicted RBP13.78□□□□□ -0.2
TPM1-219ENST00000559397 PRSS57Q6UWY2 283 aa13.78□□□□□ -0.2
TPM1-219ENST00000559397 MUC20Q8N307 709 aaPredicted RBP13.78□□□□□ -0.2
TPM1-219ENST00000559397 SPICQ8N5J4 248 aa13.78□□□□□ -0.2
TPM1-219ENST00000559397 TMEM185AQ8NFB2 350 aa13.78□□□□□ -0.2
TPM1-219ENST00000559397 ZNF431Q8TF32 576 aaPredicted RBP13.78□□□□□ -0.2
TPM1-219ENST00000559397 FAM168AQ92567 244 aa13.78□□□□□ -0.2
TPM1-219ENST00000559397 FOXC2Q99958 501 aa13.78□□□□□ -0.2
TPM1-219ENST00000559397 ZNF69Q9UC07 566 aa13.78□□□□□ -0.2
TPM1-219ENST00000559397 MEIKINA0A087WXM9 373 aa13.77□□□□□ -0.21
TPM1-219ENST00000559397 VWC2LB2RUY7 222 aa13.77□□□□□ -0.21
TPM1-219ENST00000559397 ZBTB25P24278 435 aa13.77□□□□□ -0.21
TPM1-219ENST00000559397 ECI1P42126 302 aa13.77□□□□□ -0.21
TPM1-219ENST00000559397 NPY4RP50391 375 aa13.77□□□□□ -0.21
TPM1-219ENST00000559397 CLEC12BQ2HXU8 276 aa13.77□□□□□ -0.21
TPM1-219ENST00000559397 C4orf46Q504U0 113 aa13.77□□□□□ -0.21
TPM1-219ENST00000559397 AVPI1Q5T686 147 aa13.77□□□□□ -0.21
TPM1-219ENST00000559397 ZNF497Q6ZNH5 498 aa13.77□□□□□ -0.21
TPM1-219ENST00000559397 C17orf107Q6ZR85 190 aa13.77□□□□□ -0.21
TPM1-219ENST00000559397 DEFB108BQ8NET1 73 aa13.77□□□□□ -0.21
TPM1-219ENST00000559397 RAB1CQ92928 201 aa13.77□□□□□ -0.21
TPM1-219ENST00000559397 BPESC1Q9GZL8 116 aa13.77□□□□□ -0.21
TPM1-219ENST00000559397 C5orf66Q9H5L9 145 aa13.77□□□□□ -0.21
TPM1-219ENST00000559397 IGHV4-30-2A0A087WSY4 118 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 TRAV38-1A0A0B4J264 116 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 KIR2DS1A0A191URI9 304 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 TRDCB7Z8K6 153 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 H7C1Q1 480 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 TNFRSF13BO14836 293 aaPredicted RBP13.76□□□□□ -0.21
TPM1-219ENST00000559397 PSG2P11465 335 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 MUC1P15941 1255 aaPredicted RBP13.76□□□□□ -0.21
TPM1-219ENST00000559397 KIR2DS4P43632 304 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 UBE2MP61081 183 aaKnown RBP13.76□□□□□ -0.21
TPM1-219ENST00000559397 DHODHQ02127 395 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 DHRS2Q13268 280 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 KIR2DS1Q14954 304 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 Q5PR19 223 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 STUMQ69YW2 141 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 ADAD2Q8NCV1 583 aaKnown RBP13.76□□□□□ -0.21
TPM1-219ENST00000559397 PLPPR1Q8TBJ4 325 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 TIMD4Q96H15 378 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 ZNF2Q9BSG1 426 aaPredicted RBP13.76□□□□□ -0.21
TPM1-219ENST00000559397 PIMREGQ9BSJ6 248 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 DNAJB11Q9UBS4 358 aa13.76□□□□□ -0.21
TPM1-219ENST00000559397 PRRC2AP48634 2157 aaKnown RBP13.76□□□□□ -0.21
TPM1-219ENST00000559397 RFPL4AA6NLU0 287 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 RFPL4AL1F8VTS6 287 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 FABP7O15540 132 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 PSPNO60542 156 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 CEBPDP49716 269 aaPredicted RBP13.75□□□□□ -0.21
TPM1-219ENST00000559397 TAS2R31P59538 309 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 OR5T2Q8NGG2 359 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 ANGPTL6Q8NI99 470 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 DMRTB1Q96MA1 342 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 TMEM246Q9BRR3 403 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 RTBDNQ9BSG5 229 aaPredicted RBP13.75□□□□□ -0.21
TPM1-219ENST00000559397 OR14J1Q9UGF5 321 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 ZNF222Q9UK12 451 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 IGKV1D-17A0A075B6S4 117 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 GYPAP02724 150 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 KCNJ3P48549 501 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 ZFP69Q49AA0 526 aa13.75□□□□□ -0.21
TPM1-219ENST00000559397 TMEM155Q4W5P6 130 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms