RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 TAS2R20P59543 309 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 C17orf58Q2M2W7 97 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 RFESDQ8TAC1 157 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 TBX15Q96SF7 602 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 NCOR1P1Q9H4R4 102 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 C12orf4Q9NQ89 552 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 MRPS7Q9Y2R9 242 aaKnown RBP12.54□□□□□ -0.4
NEDD1-213ENST00000557644 KPTNQ9Y664 436 aa12.54□□□□□ -0.4
NEDD1-213ENST00000557644 NSD1Q96L73 2696 aaPredicted RBP12.53□□□□□ -0.4
NEDD1-213ENST00000557644 ARFRP1Q13795 201 aa12.53□□□□□ -0.4
NEDD1-213ENST00000557644 HACD4Q5VWC8 232 aa12.53□□□□□ -0.4
NEDD1-213ENST00000557644 BAIAP2L2Q6UXY1 529 aa12.53□□□□□ -0.4
NEDD1-213ENST00000557644 ZNF782Q6ZMW2 699 aaPredicted RBP12.53□□□□□ -0.4
NEDD1-213ENST00000557644 VMO1Q7Z5L0 202 aa12.53□□□□□ -0.4
NEDD1-213ENST00000557644 PDZD9Q8IXQ8 264 aa12.53□□□□□ -0.4
NEDD1-213ENST00000557644 SETD6Q8TBK2 473 aa12.53□□□□□ -0.4
NEDD1-213ENST00000557644 AUNIPQ9H7T9 357 aa12.53□□□□□ -0.4
NEDD1-213ENST00000557644 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.53□□□□□ -0.4
NEDD1-213ENST00000557644 EXTL2Q9UBQ6 330 aa12.53□□□□□ -0.4
NEDD1-213ENST00000557644 ZNF230Q9UIE0 474 aaPredicted RBP12.53□□□□□ -0.4
NEDD1-213ENST00000557644 C17orf98A8MV24 154 aa12.52□□□□□ -0.4
NEDD1-213ENST00000557644 J3QLI3 93 aa12.52□□□□□ -0.4
NEDD1-213ENST00000557644 M0R1W7 72 aa12.52□□□□□ -0.4
NEDD1-213ENST00000557644 GSTP1P09211 210 aaKnown RBP12.52□□□□□ -0.4
NEDD1-213ENST00000557644 CD3GP09693 182 aa12.52□□□□□ -0.4
NEDD1-213ENST00000557644 GDNFP39905 211 aa12.52□□□□□ -0.4
NEDD1-213ENST00000557644 CNPY1Q3B7I2 92 aa12.52□□□□□ -0.4
NEDD1-213ENST00000557644 PRAMEF5Q5TYX0 476 aa12.52□□□□□ -0.4
NEDD1-213ENST00000557644 CNIH2Q6PI25 160 aa12.52□□□□□ -0.4
NEDD1-213ENST00000557644 PRR18Q8N4B5 295 aa12.52□□□□□ -0.4
NEDD1-213ENST00000557644 KIR3DL3Q8N743 410 aa12.52□□□□□ -0.4
NEDD1-213ENST00000557644 MAFIPQ8WZ33 124 aa12.52□□□□□ -0.4
NEDD1-213ENST00000557644 DMRTB1Q96MA1 342 aa12.52□□□□□ -0.4
NEDD1-213ENST00000557644 MBNL3Q9NUK0 354 aaKnown RBP12.52□□□□□ -0.4
NEDD1-213ENST00000557644 CALYQ9NYX4 217 aa12.52□□□□□ -0.4
NEDD1-213ENST00000557644 MXRA5Q9NR99 2828 aa12.52□□□□□ -0.4
NEDD1-213ENST00000557644 KBTBD11-OT1A0A1B0GTJ5 212 aa12.52□□□□□ -0.41
NEDD1-213ENST00000557644 A0A1W2PPH5 198 aa12.52□□□□□ -0.41
NEDD1-213ENST00000557644 C12orf77C9JDV5 145 aa12.52□□□□□ -0.41
NEDD1-213ENST00000557644 HLA-DQB1P01920 261 aa12.52□□□□□ -0.41
NEDD1-213ENST00000557644 LTC4SQ16873 150 aa12.52□□□□□ -0.41
NEDD1-213ENST00000557644 FAM120AOSQ5T036 256 aa12.52□□□□□ -0.41
NEDD1-213ENST00000557644 UTF1Q5T230 341 aa12.52□□□□□ -0.41
NEDD1-213ENST00000557644 MMP27Q9H306 513 aa12.52□□□□□ -0.41
NEDD1-213ENST00000557644 TAS2R3Q9NYW6 316 aa12.52□□□□□ -0.41
NEDD1-213ENST00000557644 IGHV3OR16-10A0A075B7F0 116 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 FAM172BPA6NC97 362 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 C15orf65H3BRN8 121 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 SSX5O60225 188 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 MRPS15P82914 257 aaKnown RBP12.51□□□□□ -0.41
NEDD1-213ENST00000557644 KLRD1Q13241 179 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 FAM53AQ6NSI3 398 aaPredicted RBP12.51□□□□□ -0.41
NEDD1-213ENST00000557644 ARL11Q969Q4 196 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 GAL3ST2Q9H3Q3 398 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 METTL8Q9H825 291 aaKnown RBP12.51□□□□□ -0.41
NEDD1-213ENST00000557644 ZNF729A6NN14 1252 aaPredicted RBP12.51□□□□□ -0.41
NEDD1-213ENST00000557644 CLPXO76031 633 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 FCGR3AP08637 254 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 IGHV1-8P0DP01 117 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 GZMHP20718 246 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 TNFSF8P32971 234 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 MNDAP41218 407 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 GNG2P59768 71 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 GUCA2AQ02747 115 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 ARL6IP1Q15041 203 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 ZNF880Q6PDB4 577 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 C1orf122Q6ZSJ8 110 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 SNX29P2Q8IUI4 249 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 TNFRSF14Q92956 283 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 DIRAS2Q96HU8 199 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 RIMS4Q9H426 269 aaPredicted RBP12.51□□□□□ -0.41
NEDD1-213ENST00000557644 TAF9BQ9HBM6 251 aa12.51□□□□□ -0.41
NEDD1-213ENST00000557644 FN1P02751 2386 aaKnown RBP12.51□□□□□ -0.41
NEDD1-213ENST00000557644 TRBV6-6A0A0A6YYG2 114 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 MEIOCA2RUB1 952 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 INAFM1C9JVW0 142 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 FCER2P06734 321 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 MELTFP08582 738 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 PRTN3P24158 256 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 KLF17Q5JT82 389 aaPredicted RBP12.5□□□□□ -0.41
NEDD1-213ENST00000557644 OR1L1Q8NH94 360 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 LHX4Q969G2 390 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 UPRTQ96BW1 309 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 Q9N2K0 584 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 A3GALT2U3KPV4 340 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 CUBNO60494 3623 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 TRAV40A0A0B4J280 105 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 MEIS3P1A6NDR6 274 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 NPIPB11E5RHQ5 1161 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 HBZP02008 142 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 IGHV4-38-2P0DP08 117 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 TALDO1P37837 337 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 PNLIPRP3Q17RR3 467 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 HEPN1Q6WQI6 88 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 KIRREL1Q96J84 757 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 LINC00574Q9H8X3 128 aa12.5□□□□□ -0.41
NEDD1-213ENST00000557644 IGKV1D-8A0A087WSZ0 117 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 RNASEK-C17orf49H0YIS7 233 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 IGHV3-7P01780 117 aa12.49□□□□□ -0.41
NEDD1-213ENST00000557644 HOXB4P17483 251 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms