RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 PRRT1Q99946 306 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 OCSTAMPQ9BR26 566 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 SEC22CQ9BRL7 303 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 TINAGL1Q9GZM7 467 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-230ENST00000557427 METTL9Q9H1A3 318 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 RANBP3Q9H6Z4 567 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-230ENST00000557427 UFSP2Q9NUQ7 469 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 IL36GQ9NZH8 169 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 ZNF222Q9UK12 451 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 SLC7A11Q9UPY5 501 aa10.35□□□□□ -0.75
SHMT2-230ENST00000557427 PPIAL4EA0A075B759 164 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 PPIAL4CA0A0B4J2A2 164 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 CLPSL1A2RUU4 121 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 SERPINE3A8MV23 424 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 PPIAL4DF5H284 164 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 C3orf80F5H4A9 247 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 TRAPPC2LH3BP13 241 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 M0QYG6 137 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 ZNF780AO75290 641 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-230ENST00000557427 PPIAL4FP0DN26 164 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 TMEM225BP0DP42 221 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 VSIG10L2P0DP72 767 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 CXCL3P19876 107 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 SERPINA2P20848 420 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 FAM201AQ5SY85 155 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 SAMD5Q5TGI4 173 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 PRAMEF6Q5VXH4 476 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 IDO2Q6ZQW0 420 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 BOLLQ8N9W6 283 aaKnown RBP10.34□□□□□ -0.75
SHMT2-230ENST00000557427 CSNK2A3Q8NEV1 391 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 OR4F5Q8NH21 305 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 CCDC107Q8WV48 283 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 CAPSLQ8WWF8 208 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 ZNF436Q9C0F3 470 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-230ENST00000557427 TMEM165Q9HC07 324 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 PCDHB16Q9NRJ7 776 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 KCNK7Q9Y2U2 307 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 AUP1Q9Y679 476 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 DNAH3Q8TD57 4116 aa10.34□□□□□ -0.75
SHMT2-230ENST00000557427 IGKV1-27A0A075B6S5 117 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 IGHV3OR16-10A0A075B7F0 116 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 FAM230AA0A1W2PPH8 454 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 TMEM82A0PJX8 343 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 UBE2QL1A1L167 161 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 LRRC30A6NM36 301 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 FABP7O15540 132 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 HOXA3O43365 443 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-230ENST00000557427 AKR7A2O43488 359 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 CST4P01036 141 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 RLN1P04808 185 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 IGHV4-38-2P0DP08 117 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 IRF2P14316 349 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 BLVRBP30043 206 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-230ENST00000557427 MDH2P40926 338 aaKnown RBP10.33□□□□□ -0.76
SHMT2-230ENST00000557427 SEC61A1P61619 476 aaKnown RBP10.33□□□□□ -0.76
SHMT2-230ENST00000557427 ZNF154Q13106 437 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 RSU1Q15404 277 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 MPPED2Q15777 294 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 C11orf87Q6NUJ2 197 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 C9orf139Q6ZV77 190 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 MOB3CQ70IA8 216 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 ZSCAN4Q8NAM6 433 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-230ENST00000557427 MRAPQ8TCY5 172 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 ST8SIA4Q92187 359 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 MRPS24Q96EL2 167 aaKnown RBP10.33□□□□□ -0.76
SHMT2-230ENST00000557427 ARHGAP5-AS1Q96IT6 56 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 Q96M66 194 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 PECRQ9BY49 303 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 MS4A7Q9GZW8 240 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-230ENST00000557427 SLA2Q9H6Q3 261 aa10.33□□□□□ -0.76
SHMT2-230ENST00000557427 PATZ1Q9HBE1 687 aaKnown RBP10.33□□□□□ -0.76
SHMT2-230ENST00000557427 IFNL4K9M1U5 179 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 FOXH1O75593 365 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 NDUFA7O95182 113 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 HTR3BO95264 441 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 CSTBP04080 98 aaKnown RBP10.32□□□□□ -0.76
SHMT2-230ENST00000557427 FCER2P06734 321 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 GRPP07492 148 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 HOXA4Q00056 320 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-230ENST00000557427 ARFRP1Q13795 201 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 TMEM155Q4W5P6 130 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 DMRTC1Q5HYR2 192 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 PLCXD3Q63HM9 321 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 HOGA1Q86XE5 327 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 GVQW1Q8N7I0 195 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 OR4S1Q8NGB4 309 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 OR56B2PQ8NGI1 322 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 OR13C8Q8NGS7 320 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 OR11L1Q8NGX0 322 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 OR10K1Q8NGX5 313 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 PIGCQ92535 297 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 ELL3Q9HB65 397 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-230ENST00000557427 HSF4Q9ULV5 492 aa10.32□□□□□ -0.76
SHMT2-230ENST00000557427 A0A1B0GWJ7 208 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 CEACAM18A8MTB9 384 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 OR2A4O95047 310 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 WNT2P09544 360 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 GIPP09681 153 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-230ENST00000557427 HRH1P35367 487 aa10.31□□□□□ -0.76
SHMT2-230ENST00000557427 CD200P41217 278 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms