RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 HES4Q9HCC6 221 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 RASL12Q9NYN1 266 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 ITGB1BP2Q9UKP3 347 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 ODAMA1E959 279 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 IGHV4-39P01824 125 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 OR8U9P0C7N5 309 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 PPP1CCP36873 323 aaKnown RBP8.49□□□□□ -1.05
NEK9-205ENST00000555405 GNG10P50151 68 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 EFNA4P52798 201 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 CDK10Q15131 360 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 METTL11BQ5VVY1 283 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 Q6ZPA2 131 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 BTN2A1Q7KYR7 527 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 OR8U1Q8NH10 309 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 RBMXL1Q96E39 390 aaKnown RBP8.49□□□□□ -1.05
NEK9-205ENST00000555405 OCSTAMPQ9BR26 566 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 SEC22CQ9BRL7 303 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 FAM234AQ9H0X4 552 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 Q9N2K0 584 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 PRR13Q9NZ81 148 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 RABL2AQ9UBK7 228 aaPredicted RBP8.49□□□□□ -1.05
NEK9-205ENST00000555405 CLN8Q9UBY8 286 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 RABL2BQ9UNT1 228 aa8.49□□□□□ -1.05
NEK9-205ENST00000555405 H3BUI4 141 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 HSD17B6O14756 317 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 MGST3O14880 152 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 PFDN1O60925 122 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 CEACAM6P40199 344 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 OXA1LQ15070 435 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 Q8NFD4 153 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 OR52B4Q8NGK2 314 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 OR10J5Q8NHC4 309 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 UPRTQ96BW1 309 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 NECAP2Q9NVZ3 263 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 CTSZQ9UBR2 303 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 APCP25054 2843 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 FAM90A10PA6NDY2 464 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 FAM90A18PA6NE21 464 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 FAM90A16PA6NEW6 464 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 FAM90A20PA6NIJ5 464 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 FAM90A8PA6NJQ4 464 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 FAM90A7PA6NKC0 464 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 FAM90A22PA8MWA6 464 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 FAM90A12PA8MX19 464 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 FAM90A5PA8MXJ8 464 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 FAM90A23PA8MXZ1 464 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 K7N7A8 449 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 PTTG1O95997 202 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 F12P00748 615 aaPredicted RBP8.48□□□□□ -1.05
NEK9-205ENST00000555405 HBZP02008 142 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 FAM90A15PP0C7V4 464 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 FAM90A13PP0C7W8 464 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 FAM90A14PP0C7W9 464 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 FAM90A24PP0C7X0 464 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 TAS2R46P59540 309 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 DYRK1AQ13627 763 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 NHLRC3Q5JS37 347 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 STUMQ69YW2 141 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 MED30Q96HR3 178 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 PARP12Q9H0J9 701 aaKnown RBP8.48□□□□□ -1.05
NEK9-205ENST00000555405 C19orf12Q9NSK7 152 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 RBMX2Q9Y388 322 aaKnown RBP8.48□□□□□ -1.05
NEK9-205ENST00000555405 TRDCB7Z8K6 153 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 C12orf77C9JDV5 145 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 ZNF737O75373 536 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 ADH4P08319 380 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 ACAA1P09110 424 aaPredicted RBP8.48□□□□□ -1.05
NEK9-205ENST00000555405 FBN2P35556 2912 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 CFHR2P36980 270 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 MDH2P40926 338 aaKnown RBP8.48□□□□□ -1.05
NEK9-205ENST00000555405 LCN2P80188 198 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 GNMTQ14749 295 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 ZNF788Q6ZQV5 615 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 NLRC3Q7RTR2 1065 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 CHPT1Q8WUD6 406 aa8.48□□□□□ -1.05
NEK9-205ENST00000555405 RCC2Q9P258 522 aaKnown RBP8.48□□□□□ -1.05
NEK9-205ENST00000555405 TRGV10A0A0A0MS01 117 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 TEX13DA0A0J9YY54 714 aaPredicted RBP8.47□□□□□ -1.05
NEK9-205ENST00000555405 DIRAS3O95661 229 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 GLAP06280 429 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 RPA2P15927 270 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 AADACP22760 399 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 GNB2P62879 340 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 MEF2DQ14814 521 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 ZNF497Q6ZNH5 498 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 LINC00596Q86U02 117 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 Q8TCH9 128 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 GALMQ96C23 342 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 ONECUT1Q9UBC0 465 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 MTORP42345 2549 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 CSMD1Q96PZ7 3565 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 KIR2DS1A0A191URI9 304 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 IFNL4K9M1U5 179 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 SIGLEC5O15389 551 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 SPINT2O43291 252 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 SSNA1O43805 119 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 DHFRP00374 187 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 BTCP35070 178 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 KIR2DS4P43632 304 aa8.47□□□□□ -1.05
NEK9-205ENST00000555405 ARF6P62330 175 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms