RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 RTN4RL2Q86UN3 420 aa13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 TEX29Q8N6K0 151 aa13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 OR13A1Q8NGR1 328 aa13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 DIRAS2Q96HU8 199 aa13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 CHMP1AQ9HD42 196 aaPredicted RBP13.53□□□□□ -0.24
SPTLC2-203ENST00000554901 DSCAML1Q8TD84 2053 aa13.52□□□□□ -0.24
SPTLC2-203ENST00000554901 ZNF469Q96JG9 3925 aaPredicted RBP13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 HLA-DQB1P01920 261 aa13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 TNFSF8P32971 234 aa13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 GLP1RP43220 463 aa13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 TMEM30BQ3MIR4 351 aa13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 Q6ZS49 121 aa13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 OR10A7Q8NGE5 316 aa13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 OR4K15Q8NH41 348 aa13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 SIRPDQ9H106 197 aa13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 METTL8Q9H825 291 aaKnown RBP13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 KCNIP1Q9NZI2 227 aa13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 ONECUT1Q9UBC0 465 aa13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 AUP1Q9Y679 476 aa13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 WNK2Q9Y3S1 2297 aa13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 TLN2Q9Y4G6 2542 aa13.52□□□□□ -0.25
SPTLC2-203ENST00000554901 NPIPB11E5RHQ5 1161 aa13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 CBX5P45973 191 aa13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 ARF6P62330 175 aa13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 FAHD2BQ6P2I3 314 aaPredicted RBP13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 HEPN1Q6WQI6 88 aa13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 IZUMO1Q8IYV9 350 aa13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 C11orf42Q8N5U0 333 aa13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 OR6Q1Q8NGQ2 317 aa13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 MRGPRDQ8TDS7 321 aa13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 FAHD2AQ96GK7 314 aa13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 C7orf69Q9H7B7 122 aa13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 SCPEP1Q9HB40 452 aa13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 TMEM160Q9NX00 188 aa13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 CALYQ9NYX4 217 aa13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 MRPS7Q9Y2R9 242 aaKnown RBP13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 ARHGAP32A7KAX9 2087 aa13.51□□□□□ -0.25
SPTLC2-203ENST00000554901 SULT1C2O00338 296 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 SPINT2O43291 252 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 TOX4O94842 621 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 FCGR3AP08637 254 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 MMP9P14780 707 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 CCL3L1P16619 93 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 RCC1P18754 421 aaPredicted RBP13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 PRTN3P24158 256 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 PRSS3P35030 304 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 MRPS10P82664 201 aaKnown RBP13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 PYHIN1Q6K0P9 492 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 CCDC107Q8WV48 283 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 UPRTQ96BW1 309 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 CYYR1Q96J86 154 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 OCSTAMPQ9BR26 566 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 HDHD3Q9BSH5 251 aaPredicted RBP13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 TMPRSS13Q9BYE2 586 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 Q9N2K0 584 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 F8P00451 2351 aa13.5□□□□□ -0.25
SPTLC2-203ENST00000554901 A8MV72 311 aaPredicted RBP13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 C15orf65H3BRN8 121 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 LY6G6DO95868 133 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 PTBP1P26599 531 aaKnown RBP eCLIP13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 ETV6P41212 452 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 KIR2DS4P43632 304 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 ERVFRD-1P60508 538 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 KIR2DS1Q14954 304 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 HMGN3Q15651 99 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 C17orf58Q2M2W7 97 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 OR52W1Q6IF63 320 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 CLEC9AQ6UXN8 241 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 Q8N7P7 452 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 OR52M1Q8NGK5 317 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 NUDCD2Q8WVJ2 157 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 ARL11Q969Q4 196 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 SOSTQ9BQB4 213 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 TAF9BQ9HBM6 251 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 ELF5Q9UKW6 265 aaPredicted RBP13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 FABP12A6NFH5 140 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 C12orf77C9JDV5 145 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 CTDSPLO15194 276 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 SSX5O60225 188 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 DIRAS3O95661 229 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 LPLP06858 475 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 IGHV1-8P0DP01 117 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 SPANXN2Q5MJ10 180 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 NCR3LG1Q68D85 454 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 CCDC190Q86UF4 302 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 HEXA-AS1Q9H8Q6 139 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 SESN1Q9Y6P5 492 aa13.49□□□□□ -0.25
SPTLC2-203ENST00000554901 TRAV39A0A0B4J263 110 aa13.48□□□□□ -0.25
SPTLC2-203ENST00000554901 F2RL2O00254 374 aa13.48□□□□□ -0.25
SPTLC2-203ENST00000554901 FPR2P25090 351 aa13.48□□□□□ -0.25
SPTLC2-203ENST00000554901 SSTR5P35346 364 aa13.48□□□□□ -0.25
SPTLC2-203ENST00000554901 HLA-DRB3P79483 266 aa13.48□□□□□ -0.25
SPTLC2-203ENST00000554901 IL18Q14116 193 aa13.48□□□□□ -0.25
SPTLC2-203ENST00000554901 Q6ZPA2 131 aa13.48□□□□□ -0.25
SPTLC2-203ENST00000554901 SNX29P2Q8IUI4 249 aa13.48□□□□□ -0.25
SPTLC2-203ENST00000554901 DTX3Q8N9I9 347 aa13.48□□□□□ -0.25
SPTLC2-203ENST00000554901 SETD6Q8TBK2 473 aa13.48□□□□□ -0.25
SPTLC2-203ENST00000554901 GPX8Q8TED1 209 aa13.48□□□□□ -0.25
SPTLC2-203ENST00000554901 ABHD1Q96SE0 405 aa13.48□□□□□ -0.25
SPTLC2-203ENST00000554901 ZNF286AQ9HBT8 521 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms