RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 CD3GP09693 182 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 CGB3P0DN86 165 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 CGB7P0DN87 165 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 SRD5A1P18405 259 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 CDNFQ49AH0 187 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 HEPN1Q6WQI6 88 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 ZNF554Q86TJ5 538 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 OR10A7Q8NGE5 316 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 OR4K15Q8NH41 348 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 DYRK2Q92630 601 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 LHX4Q969G2 390 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 LINC00574Q9H8X3 128 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.58■□□□□ 0.4
NEK3-202ENST00000550841 SIRT7Q9NRC8 400 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 MGAT4AQ9UM21 535 aa17.58■□□□□ 0.4
NEK3-202ENST00000550841 TRBV6-6A0A0A6YYG2 114 aa17.57■□□□□ 0.4
NEK3-202ENST00000550841 CLPXO76031 633 aa17.57■□□□□ 0.4
NEK3-202ENST00000550841 APOA1P02647 267 aa17.57■□□□□ 0.4
NEK3-202ENST00000550841 GSTP1P09211 210 aaKnown RBP17.57■□□□□ 0.4
NEK3-202ENST00000550841 IGHV1-8P0DP01 117 aa17.57■□□□□ 0.4
NEK3-202ENST00000550841 GNB3P16520 340 aa17.57■□□□□ 0.4
NEK3-202ENST00000550841 OR13D1Q8NGV5 346 aa17.57■□□□□ 0.4
NEK3-202ENST00000550841 MRPL30Q8TCC3 161 aaKnown RBP17.57■□□□□ 0.4
NEK3-202ENST00000550841 C12orf4Q9NQ89 552 aa17.57■□□□□ 0.4
NEK3-202ENST00000550841 MBNL3Q9NUK0 354 aaKnown RBP17.57■□□□□ 0.4
NEK3-202ENST00000550841 CALYQ9NYX4 217 aa17.57■□□□□ 0.4
NEK3-202ENST00000550841 SESN1Q9Y6P5 492 aa17.57■□□□□ 0.4
NEK3-202ENST00000550841 A0A075B6Q4 140 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 CENPVL3A0A0U1RRI6 287 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 DPPA5A6NC42 116 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 MFNGO00587 321 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 SPINT2O43291 252 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 XRCC3O43542 346 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 NAPSAO96009 420 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 FSHBP01225 129 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 CDK2P24941 298 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 FPR2P25090 351 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 TALDO1P37837 337 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 UBE2E1P51965 193 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 PITPNAQ00169 270 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 ARFRP1Q13795 201 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 PNLIPRP3Q17RR3 467 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 C17orf58Q2M2W7 97 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 IL17RELQ6ZVW7 336 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 MOB1BQ7L9L4 216 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 TNFRSF14Q92956 283 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 ARL11Q969Q4 196 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 MDFIQ99750 246 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 IDI2-AS1Q9NZ38 188 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 KCNK7Q9Y2U2 307 aa17.56■□□□□ 0.4
NEK3-202ENST00000550841 SONP18583 2426 aaKnown RBP17.56■□□□□ 0.4
NEK3-202ENST00000550841 TRAV18A0A075B6X5 111 aa17.55■□□□□ 0.4
NEK3-202ENST00000550841 TRAV39A0A0B4J263 110 aa17.55■□□□□ 0.4
NEK3-202ENST00000550841 TRAV40A0A0B4J280 105 aa17.55■□□□□ 0.4
NEK3-202ENST00000550841 IGHV1-69DA0A0B4J2H0 117 aa17.55■□□□□ 0.4
NEK3-202ENST00000550841 NPIPB11E5RHQ5 1161 aa17.55■□□□□ 0.4
NEK3-202ENST00000550841 IGHV1-69P01742 117 aa17.55■□□□□ 0.4
NEK3-202ENST00000550841 TMEM30BQ3MIR4 351 aa17.55■□□□□ 0.4
NEK3-202ENST00000550841 ZNF260Q3ZCT1 412 aa17.55■□□□□ 0.4
NEK3-202ENST00000550841 KLF17Q5JT82 389 aaPredicted RBP17.55■□□□□ 0.4
NEK3-202ENST00000550841 MS4A7Q9GZW8 240 aaPredicted RBP17.55■□□□□ 0.4
NEK3-202ENST00000550841 ZMAT3Q9HA38 289 aaKnown RBP17.55■□□□□ 0.4
NEK3-202ENST00000550841 ADAM30Q9UKF2 790 aa17.55■□□□□ 0.4
NEK3-202ENST00000550841 MNDAP41218 407 aa17.54■□□□□ 0.4
NEK3-202ENST00000550841 HACD4Q5VWC8 232 aa17.54■□□□□ 0.4
NEK3-202ENST00000550841 ZNF880Q6PDB4 577 aa17.54■□□□□ 0.4
NEK3-202ENST00000550841 ZNF782Q6ZMW2 699 aaPredicted RBP17.54■□□□□ 0.4
NEK3-202ENST00000550841 RTN4RL2Q86UN3 420 aa17.54■□□□□ 0.4
NEK3-202ENST00000550841 RFESDQ8TAC1 157 aa17.54■□□□□ 0.4
NEK3-202ENST00000550841 SETD6Q8TBK2 473 aa17.54■□□□□ 0.4
NEK3-202ENST00000550841 TMEM133Q9H2Q1 129 aa17.54■□□□□ 0.4
NEK3-202ENST00000550841 FN1P02751 2386 aaKnown RBP17.53■□□□□ 0.4
NEK3-202ENST00000550841 FAM25AB3EWG3 89 aa17.53■□□□□ 0.4
NEK3-202ENST00000550841 FAM25CB3EWG5 89 aa17.53■□□□□ 0.4
NEK3-202ENST00000550841 FAM25GB3EWG6 89 aa17.53■□□□□ 0.4
NEK3-202ENST00000550841 RNASEK-C17orf49H0YIS7 233 aa17.53■□□□□ 0.4
NEK3-202ENST00000550841 C15orf65H3BRN8 121 aa17.53■□□□□ 0.4
NEK3-202ENST00000550841 HPGDSO60760 199 aa17.53■□□□□ 0.4
NEK3-202ENST00000550841 FAM157CP0CG43 387 aa17.53■□□□□ 0.4
NEK3-202ENST00000550841 IGHV4-38-2P0DP08 117 aa17.53■□□□□ 0.4
NEK3-202ENST00000550841 RCC1P18754 421 aaPredicted RBP17.53■□□□□ 0.4
NEK3-202ENST00000550841 GNG2P59768 71 aa17.53■□□□□ 0.4
NEK3-202ENST00000550841 TMEM69Q5SWH9 247 aa17.53■□□□□ 0.4
NEK3-202ENST00000550841 PRAMEF5Q5TYX0 476 aa17.53■□□□□ 0.4
NEK3-202ENST00000550841 OLFML2AQ68BL7 652 aa17.53■□□□□ 0.4
NEK3-202ENST00000550841 OR52M1Q8NGK5 317 aa17.53■□□□□ 0.4
NEK3-202ENST00000550841 TAF9BQ9HBM6 251 aa17.53■□□□□ 0.4
NEK3-202ENST00000550841 C12orf77C9JDV5 145 aa17.52■□□□□ 0.4
NEK3-202ENST00000550841 RGS5O15539 181 aa17.52■□□□□ 0.4
NEK3-202ENST00000550841 MELTFP08582 738 aa17.52■□□□□ 0.4
NEK3-202ENST00000550841 EPHA1P21709 976 aa17.52■□□□□ 0.4
NEK3-202ENST00000550841 OMGP23515 440 aa17.52■□□□□ 0.4
NEK3-202ENST00000550841 SSTR5P35346 364 aa17.52■□□□□ 0.4
NEK3-202ENST00000550841 PNKDQ8N490 385 aa17.52■□□□□ 0.4
NEK3-202ENST00000550841 KIRREL1Q96J84 757 aa17.52■□□□□ 0.4
NEK3-202ENST00000550841 HDHD3Q9BSH5 251 aaPredicted RBP17.52■□□□□ 0.4
NEK3-202ENST00000550841 SLIRPQ9GZT3 109 aaKnown RBP17.52■□□□□ 0.4
NEK3-202ENST00000550841 Q9N2K0 584 aa17.52■□□□□ 0.4
NEK3-202ENST00000550841 IGHV3OR16-10A0A075B7F0 116 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 F2RL2O00254 374 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms