RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 PNMA8CA0A1B0GUJ8 204 aa14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 A0A1W2PPK0 400 aa14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 ORC5O43913 435 aa14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 MAPK3P27361 379 aaPredicted RBP14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 RAB7AP51149 207 aa14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 NSUN5P1Q3KNT7 163 aa14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 TMEM95Q3KNT9 176 aa14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 ABCA11PQ4W5N1 156 aa14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 GLIPR1L1Q6UWM5 242 aa14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 ZNF497Q6ZNH5 498 aa14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 LYPD6Q86Y78 171 aa14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 OR8H3Q8N146 312 aa14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 OR5AU1Q8NGC0 362 aa14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 LEAP2Q969E1 77 aa14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 MUL1Q969V5 352 aa14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 RCC2Q9P258 522 aaKnown RBP14.88□□□□□ -0.03
CHMP1A-207ENST00000549328 TRAV39A0A0B4J263 110 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 FAM90A10PA6NDY2 464 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 FAM90A7PA6NKC0 464 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 ADARB2-AS1A8MUL3 147 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 FAM90A23PA8MXZ1 464 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 C15orf65H3BRN8 121 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 PIN1P1O15428 100 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 IGHV3-7P01780 117 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 MT-ND4P03905 459 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 MAS1P04201 325 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 AMY1AP04745 511 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 AMY2AP04746 511 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 CD83Q01151 205 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 LTC4SQ16873 150 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 CENPVQ7Z7K6 275 aaPredicted RBP14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 NKAIN3Q8N8D7 197 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 OR4F17Q8NGA8 305 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 NEK7Q8TDX7 302 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 ARL11Q969Q4 196 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 OR4F4Q96R69 305 aa14.87□□□□□ -0.03
CHMP1A-207ENST00000549328 PLXNB1O43157 2135 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 A0A1W2PPI3 338 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 MCRIP1C9JLW8 97 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 ANKRD65E5RJM6 399 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 CDK1P06493 297 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 LPLP06858 475 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 FBLN7Q53RD9 439 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 C6orf141Q5SZD1 244 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 AWAT2Q6E213 333 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 C1QL4Q86Z23 238 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 LYG1Q8N1E2 194 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 MS4A15Q8N5U1 240 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 C8orf31Q8N9H6 132 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 OR10X1Q8NGY0 326 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 R3HDM4Q96D70 268 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 UQCC2Q9BRT2 126 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 MND1Q9BWT6 205 aa14.86□□□□□ -0.03
CHMP1A-207ENST00000549328 AIPO00170 330 aa14.85□□□□□ -0.03
CHMP1A-207ENST00000549328 CA11O75493 328 aa14.85□□□□□ -0.03
CHMP1A-207ENST00000549328 GLAP06280 429 aa14.85□□□□□ -0.03
CHMP1A-207ENST00000549328 GNG10P50151 68 aa14.85□□□□□ -0.03
CHMP1A-207ENST00000549328 Q3ZCU0 254 aa14.85□□□□□ -0.03
CHMP1A-207ENST00000549328 UNQ9370/PRO34162Q6UXP9 181 aa14.85□□□□□ -0.03
CHMP1A-207ENST00000549328 GAPTQ8N292 157 aa14.85□□□□□ -0.03
CHMP1A-207ENST00000549328 LINC00311Q8N616 119 aa14.85□□□□□ -0.03
CHMP1A-207ENST00000549328 OR56B4Q8NH76 319 aa14.85□□□□□ -0.03
CHMP1A-207ENST00000549328 CCDC107Q8WV48 283 aa14.85□□□□□ -0.03
CHMP1A-207ENST00000549328 MYDGFQ969H8 173 aa14.85□□□□□ -0.03
CHMP1A-207ENST00000549328 RAB9BQ9NP90 201 aa14.85□□□□□ -0.03
CHMP1A-207ENST00000549328 GHRLQ9UBU3 117 aa14.85□□□□□ -0.03
CHMP1A-207ENST00000549328 MOB4Q9Y3A3 225 aa14.85□□□□□ -0.03
CHMP1A-207ENST00000549328 NOTCH3Q9UM47 2321 aa14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 TGP01266 2768 aa14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 GAPDHP04406 335 aaKnown RBP14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 SNRNP70P08621 437 aaKnown RBP14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 MGMTP16455 207 aa14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 LOXL3P58215 753 aa14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 ZNF816Q0VGE8 651 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 DIAPH2-AS1Q14236 149 aa14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 TMEM30BQ3MIR4 351 aa14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 KPRPQ5T749 579 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 SAMD5Q5TGI4 173 aa14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 RAB12Q6IQ22 244 aa14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 DRAM1Q8N682 238 aa14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 SELENOIQ9C0D9 397 aa14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 GFOD1Q9NXC2 390 aa14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 SCN3BQ9NY72 215 aa14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 NKX1-2Q9UD57 310 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 PEX16Q9Y5Y5 336 aa14.84□□□□□ -0.03
CHMP1A-207ENST00000549328 PTGES3LE9PB15 166 aa14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 G3V4G9 280 aa14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 SDCBPO00560 298 aaPredicted RBP14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 FGF16O43320 207 aa14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 SC5DO75845 299 aa14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 FUT3P21217 361 aa14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 GPR50Q13585 617 aa14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 SPHARQ15513 63 aa14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 BEAN1Q3B7T3 259 aa14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 ACSM3Q53FZ2 586 aa14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 SYT6Q5T7P8 510 aaPredicted RBP14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 TRAT1Q6PIZ9 186 aa14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 TMEM104Q8NE00 496 aa14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 Q96M66 194 aa14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 BANF2Q9H503 90 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms