RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 PDZD9Q8IXQ8 264 aa13.33□□□□□ -0.27
LIMS2-217ENST00000545738 MCFD2Q8NI22 146 aa13.33□□□□□ -0.27
LIMS2-217ENST00000545738 RFESDQ8TAC1 157 aa13.33□□□□□ -0.27
LIMS2-217ENST00000545738 MAFIPQ8WZ33 124 aa13.33□□□□□ -0.27
LIMS2-217ENST00000545738 NCOR1P1Q9H4R4 102 aa13.33□□□□□ -0.27
LIMS2-217ENST00000545738 ZNF230Q9UIE0 474 aaPredicted RBP13.33□□□□□ -0.27
LIMS2-217ENST00000545738 UBE2J1Q9Y385 318 aaPredicted RBP13.33□□□□□ -0.27
LIMS2-217ENST00000545738 KPTNQ9Y664 436 aa13.33□□□□□ -0.27
LIMS2-217ENST00000545738 AUP1Q9Y679 476 aa13.33□□□□□ -0.27
LIMS2-217ENST00000545738 NAV3Q8IVL0 2385 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 NF1P21359 2839 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 IGHV3OR16-10A0A075B7F0 116 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 IGKV1D-8A0A087WSZ0 117 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 TRGV10A0A0A0MS01 117 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 FAM172BPA6NC97 362 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 C12orf77C9JDV5 145 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 INAFM1C9JVW0 142 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 RGS5O15539 181 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 TOX4O94842 621 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 HLA-DQB1P01920 261 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 IGHV4-38-2P0DP08 117 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 GATA3P23771 443 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 TAS2R20P59543 309 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 GUCA2AQ02747 115 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 FAM120AOSQ5T036 256 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 HACD4Q5VWC8 232 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 KIR3DL3Q8N743 410 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 S100A16Q96FQ6 103 aaKnown RBP13.33□□□□□ -0.28
LIMS2-217ENST00000545738 CMTM3Q96MX0 182 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 AUNIPQ9H7T9 357 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 CALYQ9NYX4 217 aa13.33□□□□□ -0.28
LIMS2-217ENST00000545738 SOX21Q9Y651 276 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-217ENST00000545738 MEIOCA2RUB1 952 aa13.32□□□□□ -0.28
LIMS2-217ENST00000545738 RNASEK-C17orf49H0YIS7 233 aa13.32□□□□□ -0.28
LIMS2-217ENST00000545738 M0R1W7 72 aa13.32□□□□□ -0.28
LIMS2-217ENST00000545738 FSHBP01225 129 aa13.32□□□□□ -0.28
LIMS2-217ENST00000545738 HOXB4P17483 251 aaPredicted RBP13.32□□□□□ -0.28
LIMS2-217ENST00000545738 CNPY1Q3B7I2 92 aa13.32□□□□□ -0.28
LIMS2-217ENST00000545738 TMEM69Q5SWH9 247 aa13.32□□□□□ -0.28
LIMS2-217ENST00000545738 MZT2AQ6P582 158 aa13.32□□□□□ -0.28
LIMS2-217ENST00000545738 CNIH2Q6PI25 160 aa13.32□□□□□ -0.28
LIMS2-217ENST00000545738 PNKDQ8N490 385 aa13.32□□□□□ -0.28
LIMS2-217ENST00000545738 UPRTQ96BW1 309 aa13.32□□□□□ -0.28
LIMS2-217ENST00000545738 CMSS1Q9BQ75 279 aaKnown RBP13.32□□□□□ -0.28
LIMS2-217ENST00000545738 LINC00574Q9H8X3 128 aa13.32□□□□□ -0.28
LIMS2-217ENST00000545738 C12orf4Q9NQ89 552 aa13.32□□□□□ -0.28
LIMS2-217ENST00000545738 OR6C3Q9NZP0 311 aa13.32□□□□□ -0.28
LIMS2-217ENST00000545738 TRAPPC2LQ9UL33 140 aa13.32□□□□□ -0.28
LIMS2-217ENST00000545738 TRBV6-6A0A0A6YYG2 114 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 A0A0A6YYH2 397 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 KBTBD11-OT1A0A1B0GTJ5 212 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 FUOMA2VDF0 154 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 A6NJ64 397 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 SERPINE3A8MV23 424 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 NPIPB11E5RHQ5 1161 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 J3QLI3 93 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 CA11O75493 328 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 MELTFP08582 738 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 FCGR3AP08637 254 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 IGHV1-8P0DP01 117 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 FAM189A2Q15884 450 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 METTL11BQ5VVY1 283 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 OR1L1Q8NH94 360 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 KIRREL1Q96J84 757 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 DMRTB1Q96MA1 342 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 UNKLQ9H9P5 680 aaKnown RBP13.31□□□□□ -0.28
LIMS2-217ENST00000545738 EXTL2Q9UBQ6 330 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 LPAR3Q9UBY5 353 aa13.31□□□□□ -0.28
LIMS2-217ENST00000545738 TRAV40A0A0B4J280 105 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 FAM25AB3EWG3 89 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 FAM25CB3EWG5 89 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 FAM25GB3EWG6 89 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 H3BUI4 141 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 CLPXO76031 633 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 GSTP1P09211 210 aaKnown RBP13.3□□□□□ -0.28
LIMS2-217ENST00000545738 LTC4SQ16873 150 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 PRR18Q8N4B5 295 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 ZNF565Q8N9K5 539 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 ABHD1Q96SE0 405 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 TAF9BQ9HBM6 251 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 Q9N2K0 584 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 DIABLOQ9NR28 239 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 TAS2R3Q9NYW6 316 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 ZNRD1Q9P1U0 126 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 SETD2Q9BYW2 2564 aaPredicted RBP13.3□□□□□ -0.28
LIMS2-217ENST00000545738 CENPVL3A0A0U1RRI6 287 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 MEIS3P1A6NDR6 274 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 ZNF729A6NN14 1252 aaPredicted RBP13.3□□□□□ -0.28
LIMS2-217ENST00000545738 SCGNO76038 276 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 IGHV3-7P01780 117 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 PRTN3P24158 256 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 TNFSF8P32971 234 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 HMGN3Q15651 99 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 RUSC1-AS1Q66K80 236 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 HEPN1Q6WQI6 88 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 C1orf122Q6ZSJ8 110 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 GVQW1Q8N7I0 195 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 LEAP2Q969E1 77 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 LHX4Q969G2 390 aa13.3□□□□□ -0.28
LIMS2-217ENST00000545738 ARL11Q969Q4 196 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms