RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 PTHLHP12272 177 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 RPS2P15880 293 aaKnown RBP7.91□□□□□ -1.14
YBX3-215ENST00000544504 GZMHP20718 246 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 ARPC4P59998 168 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 MEF2CQ06413 473 aaPredicted RBP7.91□□□□□ -1.14
YBX3-215ENST00000544504 ASAH1Q13510 395 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 ATXN7L3Q14CW9 347 aaPredicted RBP7.91□□□□□ -1.14
YBX3-215ENST00000544504 TMEM30BQ3MIR4 351 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 CHRFAM7AQ494W8 412 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 RNASE10Q5GAN6 216 aaKnown RBP7.91□□□□□ -1.14
YBX3-215ENST00000544504 RSBN1Q5VWQ0 802 aaPredicted RBP7.91□□□□□ -1.14
YBX3-215ENST00000544504 STEAP3Q658P3 488 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 OLFML2AQ68BL7 652 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 STEAP1BQ6NZ63 245 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 ZNF880Q6PDB4 577 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 BRICD5Q6PL45 260 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 BPIFB2Q8N4F0 458 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 ZNF565Q8N9K5 539 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 ZNRF1Q8ND25 227 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 OR4S1Q8NGB4 309 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 OR5H2Q8NGV7 314 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 OR4K15Q8NH41 348 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 MRPL30Q8TCC3 161 aaKnown RBP7.91□□□□□ -1.14
YBX3-215ENST00000544504 FAM168AQ92567 244 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 RAB39BQ96DA2 213 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 ST6GALNAC5Q9BVH7 336 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 SHARPINQ9H0F6 387 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 Q9N2K0 584 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 KIF25Q9UIL4 384 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 TRGV10A0A0A0MS01 117 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 hADV38S2A0JD32 116 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 ODAMA1E959 279 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 CEACAM18A8MTB9 384 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 TRDCB7Z8K6 153 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 SPINT2O43291 252 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 NDUFS7O75251 213 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 LY6HO94772 140 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 RAB3DO95716 219 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 CD74P04233 296 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 SLC25A16P16260 332 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 NDUFB7P17568 137 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 EDDM3BP56851 147 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 AESQ08117 197 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 KLF9Q13886 244 aaPredicted RBP7.9□□□□□ -1.14
YBX3-215ENST00000544504 EDDM3AQ14507 147 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 RGS21Q2M5E4 152 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 KRTAP24-1Q3LI83 254 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 ESCO2Q56NI9 601 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 AVPI1Q5T686 147 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 CD276Q5ZPR3 534 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 ARRDC1Q8N5I2 433 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 ZNF525Q8N782 197 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 POC5Q8NA72 575 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 MINDY2Q8NBR6 621 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 OR5AP2Q8NGF4 316 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 OR4A4PQ8NGN8 299 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 PLPPR1Q8TBJ4 325 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 DMRTB1Q96MA1 342 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 PATZ1Q9HBE1 687 aaKnown RBP7.9□□□□□ -1.14
YBX3-215ENST00000544504 MBNL3Q9NUK0 354 aaKnown RBP7.9□□□□□ -1.14
YBX3-215ENST00000544504 NECAP2Q9NVZ3 263 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 ZNF581Q9P0T4 197 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 COPZ2Q9P299 210 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 CLN8Q9UBY8 286 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 ANXA10Q9UJ72 324 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 SCP2D1Q9UJQ7 156 aa7.9□□□□□ -1.14
YBX3-215ENST00000544504 ELF5Q9UKW6 265 aaPredicted RBP7.9□□□□□ -1.14
YBX3-215ENST00000544504 USF3Q68DE3 2245 aa7.9□□□□□ -1.15
YBX3-215ENST00000544504 MEIS3P1A6NDR6 274 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 DVL1O14640 695 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 FABP7O15540 132 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 LYRM1O43325 122 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 LANCL1O43813 399 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 PTTG1O95997 202 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 WNT2P09544 360 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 FAM157CP0CG43 387 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 GLP1RP43220 463 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 HLA-DRB3P79483 266 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 CDK10Q15131 360 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 CR1LQ2VPA4 569 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 VAX1Q5SQQ9 334 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 GVQW1Q8N7I0 195 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 FAM216BQ8N7L0 139 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 C10orf105Q8TEF2 133 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 CORO2AQ92828 525 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 COQ2Q96H96 371 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 PRRT1Q99946 306 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 HDHD3Q9BSH5 251 aaPredicted RBP7.89□□□□□ -1.15
YBX3-215ENST00000544504 GAL3ST2Q9H3Q3 398 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 TAS2R3Q9NYW6 316 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 METRNQ9UJH8 293 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 UBE2J1Q9Y385 318 aaPredicted RBP7.89□□□□□ -1.15
YBX3-215ENST00000544504 LINC00312Q9Y6C7 94 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 ARID1AO14497 2285 aa7.89□□□□□ -1.15
YBX3-215ENST00000544504 hCG_1809904A0A1W2PP81 198 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 A0A1W2PPE2 198 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 A0A1W2PR64 198 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 A0A1W2PRV1 198 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 ZNF729A6NN14 1252 aaPredicted RBP7.88□□□□□ -1.15
YBX3-215ENST00000544504 F5H0A9 414 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms