RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 VSIG4Q9Y279 399 aa11.15□□□□□ -0.63
CHD4-211ENST00000544484 MMP7P09237 267 aaPredicted RBP11.14□□□□□ -0.63
CHD4-211ENST00000544484 CAMPP49913 170 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 SUMO1P63165 101 aaKnown RBP11.14□□□□□ -0.63
CHD4-211ENST00000544484 FAM214BQ7L5A3 538 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 ADIPOR1Q96A54 375 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 PGLYRP3Q96LB9 341 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 WDR61Q9GZS3 305 aaKnown RBP11.14□□□□□ -0.63
CHD4-211ENST00000544484 CLN8Q9UBY8 286 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 EP300Q09472 2414 aaPredicted RBP11.14□□□□□ -0.63
CHD4-211ENST00000544484 IGHV3-21A0A0B4J1V1 117 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 PGA4P0DJD7 388 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 HLA-GP17693 338 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 P2RY1P47900 373 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 ATP6V1FQ16864 119 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 ATP5SQ99766 215 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 NRXN2Q9P2S2 1712 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 DNASE2O00115 360 aaPredicted RBP11.14□□□□□ -0.63
CHD4-211ENST00000544484 TCAPO15273 167 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 TIAF1O95411 115 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 FAM78BQ5VT40 261 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 GDF15Q99988 308 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 TAF1LQ8IZX4 1826 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 RBM11P57052 281 aaKnown RBP11.14□□□□□ -0.63
CHD4-211ENST00000544484 IFITM3Q01628 133 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 TMEM65Q6PI78 240 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 NOL4LQ96MY1 436 aaPredicted RBP11.14□□□□□ -0.63
CHD4-211ENST00000544484 RAB33BQ9H082 229 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 RCC2Q9P258 522 aaKnown RBP11.14□□□□□ -0.63
CHD4-211ENST00000544484 KCNK7Q9Y2U2 307 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 MDC1Q14676 2089 aaKnown RBP11.14□□□□□ -0.63
CHD4-211ENST00000544484 RBFOX3A6NFN3 312 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 F5H697 171 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 LY86O95711 162 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 RNASEKQ6P5S7 137 aaKnown RBP11.14□□□□□ -0.63
CHD4-211ENST00000544484 PHYHIPLQ96FC7 376 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 CA10Q9NS85 328 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 IL17BQ9UHF5 180 aa11.14□□□□□ -0.63
CHD4-211ENST00000544484 S100A8P05109 93 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 LGALS7P47929 136 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 RPL31P62899 125 aaKnown RBP11.13□□□□□ -0.63
CHD4-211ENST00000544484 HIST1H3AP68431 136 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 OR4P4Q8NGL7 312 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 GNG7O60262 68 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 CLDN14O95500 239 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 BRS3P32247 399 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 UCP2P55851 309 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 C1orf185Q5T7R7 199 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 ZNF826PQ6ZT77 177 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 FLYWCH2Q96CP2 140 aaKnown RBP11.13□□□□□ -0.63
CHD4-211ENST00000544484 ABCA7Q8IZY2 2146 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 J3KRW8 73 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 GATCO43716 136 aaKnown RBP11.13□□□□□ -0.63
CHD4-211ENST00000544484 PRDX2P32119 198 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 MOGAT2Q3SYC2 334 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 ZNF788Q6ZQV5 615 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 DNASE2BQ8WZ79 361 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 PCGF1Q9BSM1 259 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 LRRC37AA6NMS7 1700 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 KIF13BQ9NQT8 1826 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 PRSS44E7EML9 344 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 ARG1P05089 322 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 DAOP14920 347 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 PSG5Q15238 335 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 LGALSLQ3ZCW2 172 aaPredicted RBP11.13□□□□□ -0.63
CHD4-211ENST00000544484 CCL13Q99616 98 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 ZNF426Q9BUY5 554 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 MS4A18H0YCH9 400 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 SP9P0CG40 484 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 RAB5AP20339 215 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 RPS4Y1P22090 263 aaKnown RBP11.13□□□□□ -0.63
CHD4-211ENST00000544484 TCL1AP56279 114 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 ERVS71-1P61550 626 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 EWSR1Q01844 656 aaKnown RBP eCLIP11.13□□□□□ -0.63
CHD4-211ENST00000544484 MS4A18Q3C1V0 323 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 IGSF11Q5DX21 431 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 HOGA1Q86XE5 327 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 CYB5R1Q9UHQ9 305 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 RNF24Q9Y225 148 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 WIPI2Q9Y4P8 454 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 SNRNP200O75643 2136 aaKnown RBP11.13□□□□□ -0.63
CHD4-211ENST00000544484 PIKFYVEQ9Y2I7 2098 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 FCN1O00602 326 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 FAM162BQ5T6X4 162 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 WDR31Q8NA23 367 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 OR4A4PQ8NGN8 299 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 KCNK17Q96T54 332 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 NPTNQ9Y639 398 aa11.13□□□□□ -0.63
CHD4-211ENST00000544484 SMIM10L1P0DMW3 83 aa11.12□□□□□ -0.63
CHD4-211ENST00000544484 C9orf62Q8N4C0 152 aa11.12□□□□□ -0.63
CHD4-211ENST00000544484 SMIM10Q96HG1 83 aa11.12□□□□□ -0.63
CHD4-211ENST00000544484 TMEM208Q9BTX3 173 aa11.12□□□□□ -0.63
CHD4-211ENST00000544484 SLC25A10Q9UBX3 287 aaPredicted RBP11.12□□□□□ -0.63
CHD4-211ENST00000544484 LPAR3Q9UBY5 353 aa11.12□□□□□ -0.63
CHD4-211ENST00000544484 TUBGCP6Q96RT7 1819 aa11.12□□□□□ -0.63
CHD4-211ENST00000544484 FCGR3AP08637 254 aa11.12□□□□□ -0.63
CHD4-211ENST00000544484 TPPP2P59282 170 aa11.12□□□□□ -0.63
CHD4-211ENST00000544484 RASL11BQ9BPW5 248 aa11.12□□□□□ -0.63
CHD4-211ENST00000544484 PPIAL4EA0A075B759 164 aa11.12□□□□□ -0.63
CHD4-211ENST00000544484 TMEM210A6NLX4 147 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms