RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 MMP27Q9H306 513 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 MBNL3Q9NUK0 354 aaKnown RBP10.01□□□□□ -0.81
DDX55-210ENST00000543016 AK3Q9UIJ7 227 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 NAV3Q8IVL0 2385 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 MTORP42345 2549 aa10□□□□□ -0.81
DDX55-210ENST00000543016 NPIPB11E5RHQ5 1161 aa10□□□□□ -0.81
DDX55-210ENST00000543016 SPINT2O43291 252 aa10□□□□□ -0.81
DDX55-210ENST00000543016 MELTFP08582 738 aa10□□□□□ -0.81
DDX55-210ENST00000543016 DTYMKP23919 212 aa10□□□□□ -0.81
DDX55-210ENST00000543016 TALDO1P37837 337 aa10□□□□□ -0.81
DDX55-210ENST00000543016 MNDAP41218 407 aa10□□□□□ -0.81
DDX55-210ENST00000543016 GLP1RP43220 463 aa10□□□□□ -0.81
DDX55-210ENST00000543016 ARFRP1Q13795 201 aa10□□□□□ -0.81
DDX55-210ENST00000543016 MOGAT2Q3SYC2 334 aa10□□□□□ -0.81
DDX55-210ENST00000543016 ZNF260Q3ZCT1 412 aa10□□□□□ -0.81
DDX55-210ENST00000543016 TMEM69Q5SWH9 247 aa10□□□□□ -0.81
DDX55-210ENST00000543016 HACD4Q5VWC8 232 aa10□□□□□ -0.81
DDX55-210ENST00000543016 ZNF880Q6PDB4 577 aa10□□□□□ -0.81
DDX55-210ENST00000543016 TCF23Q7RTU1 214 aa10□□□□□ -0.81
DDX55-210ENST00000543016 C11orf42Q8N5U0 333 aa10□□□□□ -0.81
DDX55-210ENST00000543016 Q8N7P7 452 aa10□□□□□ -0.81
DDX55-210ENST00000543016 OR52M1Q8NGK5 317 aa10□□□□□ -0.81
DDX55-210ENST00000543016 MCFD2Q8NI22 146 aa10□□□□□ -0.81
DDX55-210ENST00000543016 MRPL30Q8TCC3 161 aaKnown RBP10□□□□□ -0.81
DDX55-210ENST00000543016 TBX15Q96SF7 602 aa10□□□□□ -0.81
DDX55-210ENST00000543016 GSX1Q9H4S2 264 aaPredicted RBP10□□□□□ -0.81
DDX55-210ENST00000543016 CHMP1AQ9HD42 196 aaPredicted RBP10□□□□□ -0.81
DDX55-210ENST00000543016 ING3Q9NXR8 418 aa10□□□□□ -0.81
DDX55-210ENST00000543016 KCNK7Q9Y2U2 307 aa10□□□□□ -0.81
DDX55-210ENST00000543016 SESN1Q9Y6P5 492 aa10□□□□□ -0.81
DDX55-210ENST00000543016 ZNF469Q96JG9 3925 aaPredicted RBP10□□□□□ -0.81
DDX55-210ENST00000543016 SONP18583 2426 aaKnown RBP9.99□□□□□ -0.81
DDX55-210ENST00000543016 TRAV18A0A075B6X5 111 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 HPGDSO60760 199 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 DIRAS3O95661 229 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 IGHV1-8P0DP01 117 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 GNB3P16520 340 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 CCL3L1P16619 93 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 CDK2P24941 298 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 KIR2DS4P43632 304 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 GNG2P59768 71 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 KIR2DS1Q14954 304 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 C17orf58Q2M2W7 97 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 Q3ZCU0 254 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 GPR157Q5UAW9 335 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 BAIAP2L2Q6UXY1 529 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 Q6ZS49 121 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 VMO1Q7Z5L0 202 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 RTN4RL2Q86UN3 420 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 OR13A1Q8NGR1 328 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 OR13D1Q8NGV5 346 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 OR4K15Q8NH41 348 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 MRGPRDQ8TDS7 321 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 DYRK2Q92630 601 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 PCGF1Q9BSM1 259 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 BEX2Q9BXY8 128 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 AUNIPQ9H7T9 357 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 CALYQ9NYX4 217 aa9.99□□□□□ -0.81
DDX55-210ENST00000543016 DSCAML1Q8TD84 2053 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 A0A087X0M5 115 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 A0A1B0GX30 115 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 FAM25AB3EWG3 89 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 FAM25CB3EWG5 89 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 FAM25GB3EWG6 89 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 F2RL2O00254 374 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 RGS5O15539 181 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 FSHBP01225 129 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 EIF4EP06730 217 aaKnown RBP9.98□□□□□ -0.81
DDX55-210ENST00000543016 ELK1P19419 428 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 FPR2P25090 351 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 CD34P28906 385 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 SRP14P37108 136 aaKnown RBP9.98□□□□□ -0.81
DDX55-210ENST00000543016 CBX5P45973 191 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 UBE2E1P51965 193 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 HTD2P86397 168 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 CHRFAM7AQ494W8 412 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 CCDC107Q8WV48 283 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 TNFRSF14Q92956 283 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 ARL11Q969Q4 196 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 C6orf62Q9GZU0 229 aaPredicted RBP9.98□□□□□ -0.81
DDX55-210ENST00000543016 Q9N2K0 584 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 IDI2-AS1Q9NZ38 188 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 NUP50Q9UKX7 468 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 ZANQ9Y493 2812 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 KIAA2026Q5HYC2 2103 aa9.98□□□□□ -0.81
DDX55-210ENST00000543016 C12orf77C9JDV5 145 aa9.97□□□□□ -0.81
DDX55-210ENST00000543016 C15orf65H3BRN8 121 aa9.97□□□□□ -0.81
DDX55-210ENST00000543016 SULT1C2O00338 296 aa9.97□□□□□ -0.81
DDX55-210ENST00000543016 AVPP01185 164 aa9.97□□□□□ -0.81
DDX55-210ENST00000543016 RCC1P18754 421 aaPredicted RBP9.97□□□□□ -0.81
DDX55-210ENST00000543016 S100A5P33763 92 aa9.97□□□□□ -0.81
DDX55-210ENST00000543016 HMGN3Q15651 99 aa9.97□□□□□ -0.81
DDX55-210ENST00000543016 STEAP3Q658P3 488 aa9.97□□□□□ -0.81
DDX55-210ENST00000543016 C1orf229Q6ZS94 237 aaPredicted RBP9.97□□□□□ -0.81
DDX55-210ENST00000543016 C9orf139Q6ZV77 190 aa9.97□□□□□ -0.81
DDX55-210ENST00000543016 C8orf31Q8N9H6 132 aa9.97□□□□□ -0.81
DDX55-210ENST00000543016 OR11H6Q8NGC7 330 aa9.97□□□□□ -0.81
DDX55-210ENST00000543016 CREB3L1Q96BA8 519 aa9.97□□□□□ -0.81
DDX55-210ENST00000543016 GALMQ96C23 342 aa9.97□□□□□ -0.81
DDX55-210ENST00000543016 DCUN1D5Q9BTE7 237 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms