RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 OR3A1P47881 315 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 NOVA1P51513 510 aaKnown RBP12.56□□□□□ -0.4
GCFC2-211ENST00000541687 KRTDAPP60985 99 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 NCMAPQ5T1S8 102 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 PRR27Q6MZM9 219 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 MARVELD3Q96A59 401 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 MRGPRFQ96AM1 343 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 TMEM18Q96B42 140 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 IGKV1-9A0A0C4DH69 117 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 MT-CO3P00414 261 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 FABP1P07148 127 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 ZNF735P0CB33 412 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 NDUFB7P17568 137 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 VAMP3Q15836 100 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 CXorf66Q5JRM2 361 aaPredicted RBP12.56□□□□□ -0.4
GCFC2-211ENST00000541687 COMMD1Q8N668 190 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 CHRNA10Q9GZZ6 450 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 ATP6V0CP27449 155 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 GPR12P47775 334 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 TIGITQ495A1 244 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 MRGPRDQ8TDS7 321 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 C10orf35Q96D05 121 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 ZDHHC11Q9H8X9 412 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 PPP1R14DQ9NXH3 145 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 TINAGQ9UJW2 476 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 C5orf63A6NC05 138 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 SPINK4O60575 86 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 ACTL6AO96019 429 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 VDAC1P21796 283 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 NAAAQ02083 359 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 MZT1Q08AG7 82 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 MPV17LQ2QL34 196 aa12.56□□□□□ -0.4
GCFC2-211ENST00000541687 MRPL13Q9BYD1 178 aaKnown RBP12.56□□□□□ -0.4
GCFC2-211ENST00000541687 LOC105371267A0A1B0GV96 52 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 A8MXK9 166 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 YIF1AO95070 293 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 ZNF766Q5HY98 468 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 BTNL3Q6UXE8 466 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 NTNG2Q96CW9 530 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 A0A0G2JMM0 328 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 A0A1W2PPB8 328 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 A0A1W2PRS3 328 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 RBFOX3A6NFN3 312 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 KIR3DP1A8MWS1 328 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 OR5G3P0C626 314 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 P2RY1P47900 373 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 PINX1Q96BK5 328 aaKnown RBP12.55□□□□□ -0.4
GCFC2-211ENST00000541687 SH3BGRL3Q9H299 93 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 MKI67P46013 3256 aaKnown RBP12.55□□□□□ -0.4
GCFC2-211ENST00000541687 CBY3A6NI87 242 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 TRDCB7Z8K6 153 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 DEDDO75618 318 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 ZNF708P17019 499 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 STARD6P59095 220 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 DEFB109BQ30KR1 87 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 OR2M7Q8NG81 312 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 FAM131CQ96AQ9 280 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 Q96M66 194 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 TAAR3PQ9P1P4 343 aa12.55□□□□□ -0.4
GCFC2-211ENST00000541687 SYNGR1O43759 233 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 TGIF1Q15583 401 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 BTNL8Q6UX41 500 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 SIGLECL1Q8N7X8 197 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 OR2D2Q9H210 308 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 SLC25A22Q9H936 323 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 RCC2Q9P258 522 aaKnown RBP12.54□□□□□ -0.4
GCFC2-211ENST00000541687 ZNF891A8MT65 544 aaPredicted RBP12.54□□□□□ -0.4
GCFC2-211ENST00000541687 MELTFP08582 738 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 FGF5P12034 268 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 TMEM211Q6ICI0 200 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 ZPBPQ9BS86 351 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 ZNF586Q9NXT0 402 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 PSG11Q9UQ72 335 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 PSG2P11465 335 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 UBE2G1P62253 170 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 COL19A1Q14993 1142 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 C9orf152Q5JTZ5 239 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 TPRX1Q8N7U7 411 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 ZNF251Q9BRH9 671 aa12.54□□□□□ -0.4
GCFC2-211ENST00000541687 ACTR3CQ9C0K3 210 aaPredicted RBP12.54□□□□□ -0.4
GCFC2-211ENST00000541687 A0A0A6YYD4 124 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 NPIPB13A6NJU9 1138 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 NPIPB4C9JG80 1138 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 H0YIZ8 118 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 M0R1B8 84 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 SLC31A2O15432 143 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 FGF7P21781 194 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 RPL29P47914 159 aaKnown RBP12.53□□□□□ -0.4
GCFC2-211ENST00000541687 SULT1A1P50225 295 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 SULT1A2P50226 295 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 ZNF441Q8N8Z8 693 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 OR2Z1Q8NG97 314 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 RTBDNQ9BSG5 229 aaPredicted RBP12.53□□□□□ -0.4
GCFC2-211ENST00000541687 PARP11Q9NR21 331 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 CT45A6P0DMU7 189 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 CT45A5P0DMU8 189 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 CT45A7P0DMV0 189 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 RNPS1Q15287 305 aaKnown RBP12.53□□□□□ -0.4
GCFC2-211ENST00000541687 CT45A1Q5HYN5 189 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 CT45A3Q8NHU0 189 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms