RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 MKRN2OSH3BPM6 223 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 K7EM74 188 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 PDCD6O75340 191 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 TNFSF13O75888 250 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 FAM90A15PP0C7V4 464 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 FAM90A13PP0C7W8 464 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 FAM90A14PP0C7W9 464 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 FAM90A24PP0C7X0 464 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 ADCYAP1P18509 176 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 DTYMKP23919 212 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 CD34P28906 385 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 NPBWR1P48145 328 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 NPBWR2P48146 333 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 FGF8P55075 233 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-212ENST00000540304 PPP1R1AQ13522 171 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 ARSJQ5FYB0 599 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-212ENST00000540304 FBXW12Q6X9E4 464 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 LHFPL1Q86WI0 220 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 MKXQ8IYA7 352 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 SELENOHQ8IZQ5 122 aaKnown RBP8.25□□□□□ -1.09
CLIP1-212ENST00000540304 RAB24Q969Q5 203 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 NUDT11Q96G61 164 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 FAM210BQ96KR6 192 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 SCGB3A2Q96PL1 93 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 NDUFAF3Q9BU61 184 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 PROCRQ9UNN8 238 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 NOP16Q9Y3C1 178 aaKnown RBP8.25□□□□□ -1.09
CLIP1-212ENST00000540304 INTS1Q8N201 2190 aaKnown RBP8.25□□□□□ -1.09
CLIP1-212ENST00000540304 C3orf80F5H4A9 247 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 SDCBPO00560 298 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-212ENST00000540304 LILRA1O75019 489 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 BCL3P20749 454 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 FPR2P25090 351 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 NFYBP25208 207 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 PPP1CBP62140 327 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 BLOC1S1P78537 153 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 DHODHQ02127 395 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 IGFBP7Q16270 282 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 SPATA46Q5T0L3 261 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 DCAF12L2Q5VW00 463 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 OR2T2Q6IF00 324 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 ADAD2Q8NCV1 583 aaKnown RBP8.25□□□□□ -1.09
CLIP1-212ENST00000540304 OR5T1Q8NG75 326 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 OR13G1Q8NGZ3 307 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 GPR132Q9UNW8 380 aa8.25□□□□□ -1.09
CLIP1-212ENST00000540304 IGKV1D-8A0A087WSZ0 117 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 AP4M1O00189 453 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 MSTNO14793 375 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 YIF1AO95070 293 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 FCGR3AP08637 254 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 AKR1C4P17516 323 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 FUT3P21217 361 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 PMELP40967 661 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 NPY4RP50391 375 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 FGF12P61328 243 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 GNG3P63215 75 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 IL13RA1P78552 427 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 GTF3C1Q12789 2109 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 PDCD1Q15116 288 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 SEM1Q6ZVN7 128 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 PEG10Q86TG7 708 aaKnown RBP8.24□□□□□ -1.09
CLIP1-212ENST00000540304 C17orf78Q8N4C9 275 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 WDR31Q8NA23 367 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 MITD1Q8WV92 249 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 DYRK2Q92630 601 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 STARD4Q96DR4 205 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 PHB2Q99623 299 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 TMPRSS13Q9BYE2 586 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 ANXA10Q9UJ72 324 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 ZDHHC8Q9ULC8 765 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 OSGIN2Q9Y236 505 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 A8MWP6 167 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 TRAPPC2LH3BP13 241 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 WDR1O75083 606 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 SNAPC5O75971 98 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 OR7C1O76099 320 aaPredicted RBP8.24□□□□□ -1.09
CLIP1-212ENST00000540304 CGAP01215 116 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 IGKV3-15P01624 115 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 AGAP20933 346 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 PTGER4P35408 488 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 PEA15Q15121 130 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 AADACL3Q5VUY0 350 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 BRICD5Q6PL45 260 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 CXorf67Q86X51 503 aaPredicted RBP8.24□□□□□ -1.09
CLIP1-212ENST00000540304 ZNF573Q86YE8 665 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 ZNF610Q8N9Z0 462 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 OR5M8Q8NGP6 311 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 SCNM1Q9BWG6 230 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 OR2J1Q9GZK6 312 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 C5orf66Q9H5L9 145 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 TAS2R3Q9NYW6 316 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 MTCH1Q9NZJ7 389 aa8.24□□□□□ -1.09
CLIP1-212ENST00000540304 DUS4LO95620 317 aaKnown RBP8.23□□□□□ -1.09
CLIP1-212ENST00000540304 CXCL2P19875 107 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 CA6P23280 308 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 TDGF1P3P51864 188 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 UCP2P55851 309 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 VAMP2P63027 116 aa8.23□□□□□ -1.09
CLIP1-212ENST00000540304 DAZAP2Q15038 168 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-212ENST00000540304 P2RY6Q15077 328 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms