RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.28□□□□□ -1.08
CDH13-204ENST00000539548 H1FOOQ8IZA3 346 aaPredicted RBP8.28□□□□□ -1.08
CDH13-204ENST00000539548 BATF2Q8N1L9 274 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 OR2Y1Q8NGV0 311 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 OR10D3Q8NH80 312 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 GTF3AQ92664 365 aaKnown RBP8.28□□□□□ -1.08
CDH13-204ENST00000539548 NAT6Q93015 286 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 HIST1H2BHQ93079 126 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 GPHA2Q96T91 129 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 HIST1H2BNQ99877 126 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 HIST1H2BMQ99879 126 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 REPIN1Q9BWE0 567 aaKnown RBP8.28□□□□□ -1.08
CDH13-204ENST00000539548 RIMS4Q9H426 269 aaPredicted RBP8.28□□□□□ -1.08
CDH13-204ENST00000539548 TMEM242Q9NWH2 141 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 PI4KAP42356 2102 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 SDK2Q58EX2 2172 aa8.27□□□□□ -1.08
CDH13-204ENST00000539548 ELOA3CA0A087WX78 387 aaPredicted RBP8.27□□□□□ -1.09
CDH13-204ENST00000539548 TGIF2-C20orf24A0A0A6YYL0 155 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 A0A0G2JMM0 328 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 A0A1B0GU03 582 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 A0A1W2PPB8 328 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 A0A1W2PRS3 328 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 KIR3DP1A8MWS1 328 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 KIAA1324LA8MWY0 1029 aaPredicted RBP8.27□□□□□ -1.09
CDH13-204ENST00000539548 CYTIPO60759 359 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 IFNA5P01569 189 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 WNT2P09544 360 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 F2RP25116 425 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 RPS18P62269 152 aaKnown RBP8.27□□□□□ -1.09
CDH13-204ENST00000539548 STX12Q86Y82 276 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 THNSL2Q86YJ6 484 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 HS3ST6Q96QI5 342 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 RAB40CQ96S21 281 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 FGF23Q9GZV9 251 aaPredicted RBP8.27□□□□□ -1.09
CDH13-204ENST00000539548 OPA3Q9H6K4 179 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 MRPS18CQ9Y3D5 142 aaKnown RBP8.27□□□□□ -1.09
CDH13-204ENST00000539548 TRBV23-1A0A0A0MS06 115 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 TRBV6-6A0A0A6YYG2 114 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 YKT6O15498 198 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 CYB5BO43169 146 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 TGOLN2O43493 480 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 S100GP29377 79 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 CD200P41217 278 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 HAAOP46952 286 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 CXCL12P48061 93 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 RND2P52198 227 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 CEACAM21Q3KPI0 293 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 PCSK4Q6UW60 755 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 SPNS3Q6ZMD2 512 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 MKXQ8IYA7 352 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 ZNF295-AS1Q8N0V1 137 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 OR56B2PQ8NGI1 322 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 MBD3L1Q8WWY6 194 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 TMEM45BQ96B21 275 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 GPR146Q96CH1 333 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 CISD1Q9NZ45 108 aaKnown RBP8.27□□□□□ -1.09
CDH13-204ENST00000539548 MTCH1Q9NZJ7 389 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 URGCP-MRPS24S4R325 110 aa8.27□□□□□ -1.09
CDH13-204ENST00000539548 TNRC6AQ8NDV7 1962 aaKnown RBP8.27□□□□□ -1.09
CDH13-204ENST00000539548 LAMA1P25391 3075 aa8.26□□□□□ -1.09
CDH13-204ENST00000539548 CCDC163A0A0D9SF12 145 aa8.26□□□□□ -1.09
CDH13-204ENST00000539548 TRAPPC2LH3BP13 241 aa8.26□□□□□ -1.09
CDH13-204ENST00000539548 RFPL3SP0C7P2 107 aa8.26□□□□□ -1.09
CDH13-204ENST00000539548 IGFBP4P22692 258 aa8.26□□□□□ -1.09
CDH13-204ENST00000539548 GPM6AP51674 278 aa8.26□□□□□ -1.09
CDH13-204ENST00000539548 PNRC1Q12796 327 aaPredicted RBP8.26□□□□□ -1.09
CDH13-204ENST00000539548 DNLZQ5SXM8 178 aa8.26□□□□□ -1.09
CDH13-204ENST00000539548 FAM90A2PQ658T7 463 aa8.26□□□□□ -1.09
CDH13-204ENST00000539548 ZNF324BQ6AW86 544 aaPredicted RBP8.26□□□□□ -1.09
CDH13-204ENST00000539548 ZDHHC23Q8IYP9 409 aa8.26□□□□□ -1.09
CDH13-204ENST00000539548 CLDN23Q96B33 292 aa8.26□□□□□ -1.09
CDH13-204ENST00000539548 WNT16Q9UBV4 365 aa8.26□□□□□ -1.09
CDH13-204ENST00000539548 TRIOO75962 3097 aa8.26□□□□□ -1.09
CDH13-204ENST00000539548 BDP1A6H8Y1 2624 aa8.26□□□□□ -1.09
CDH13-204ENST00000539548 A0A0G2JRQ6 117 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 LRRC3CA6NJW4 275 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 NXPH3O95157 252 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 TRGC2P03986 189 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 CD81P60033 236 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 HLA-BQ31612 363 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 ACSF3Q4G176 576 aaPredicted RBP8.25□□□□□ -1.09
CDH13-204ENST00000539548 WIPI1Q5MNZ9 446 aaPredicted RBP8.25□□□□□ -1.09
CDH13-204ENST00000539548 LYSMD4Q5XG99 296 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 ZNF880Q6PDB4 577 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 P4HA3Q7Z4N8 544 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 LINC00596Q86U02 117 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 HIST3H2BBQ8N257 126 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 ZNF383Q8NA42 475 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 OR5A2Q8NGI9 324 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 IFI44Q8TCB0 444 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 MRPL30Q8TCC3 161 aaKnown RBP8.25□□□□□ -1.09
CDH13-204ENST00000539548 SCGB1C1Q8TD33 95 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 NEK7Q8TDX7 302 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 FAM210BQ96KR6 192 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 PFDN5Q99471 154 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 PSMG3Q9BT73 122 aaPredicted RBP8.25□□□□□ -1.09
CDH13-204ENST00000539548 LINC00470Q9BZP3 86 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 RPRMQ9NS64 109 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 CRIM1Q9NZV1 1036 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 RNF150Q9ULK6 438 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms