RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 RPS4Y1P22090 263 aaKnown RBP11.08□□□□□ -0.64
SPG11-203ENST00000535302 PEBP1P30086 187 aaKnown RBP11.08□□□□□ -0.64
SPG11-203ENST00000535302 HDHD3Q9BSH5 251 aaPredicted RBP11.08□□□□□ -0.64
SPG11-203ENST00000535302 ZNF426Q9BUY5 554 aa11.08□□□□□ -0.64
SPG11-203ENST00000535302 MS4A7Q9GZW8 240 aaPredicted RBP11.08□□□□□ -0.64
SPG11-203ENST00000535302 TCF21O43680 179 aa11.08□□□□□ -0.64
SPG11-203ENST00000535302 HAND1O96004 215 aa11.08□□□□□ -0.64
SPG11-203ENST00000535302 GCGP01275 180 aa11.08□□□□□ -0.64
SPG11-203ENST00000535302 TMEM251Q8N6I4 163 aa11.08□□□□□ -0.64
SPG11-203ENST00000535302 FKBP11Q9NYL4 201 aa11.08□□□□□ -0.64
SPG11-203ENST00000535302 F11RQ9Y624 299 aaKnown RBP11.08□□□□□ -0.64
SPG11-203ENST00000535302 LINC01387J3KSC0 135 aa11.08□□□□□ -0.64
SPG11-203ENST00000535302 CCL21O00585 134 aa11.08□□□□□ -0.64
SPG11-203ENST00000535302 SGK494Q96LW2 274 aa11.08□□□□□ -0.64
SPG11-203ENST00000535302 GPR61Q9BZJ8 451 aa11.08□□□□□ -0.64
SPG11-203ENST00000535302 OR6C3Q9NZP0 311 aa11.08□□□□□ -0.64
SPG11-203ENST00000535302 THYN1Q9P016 225 aa11.08□□□□□ -0.64
SPG11-203ENST00000535302 ZNF831Q5JPB2 1677 aa11.08□□□□□ -0.64
SPG11-203ENST00000535302 CENPVL1A0A0U1RR11 272 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 ZIC3O60481 467 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 MGAT2Q10469 447 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 CDC20Q12834 499 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 C10orf111Q8N326 155 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 LRRC3BQ96PB8 259 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 TMEM262E9PQX1 116 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 FFAR1O14842 300 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 LANCL1O43813 399 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 NUDT3O95989 172 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 F12P00748 615 aaPredicted RBP11.07□□□□□ -0.64
SPG11-203ENST00000535302 C19orf54Q5BKX5 351 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 SCMH1Q96GD3 660 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 RAB1CQ92928 201 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 PACRGQ96M98 296 aaPredicted RBP11.07□□□□□ -0.64
SPG11-203ENST00000535302 GUCD1Q96NT3 240 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 REPIN1Q9BWE0 567 aaKnown RBP11.07□□□□□ -0.64
SPG11-203ENST00000535302 KCNMB2Q9Y691 235 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 LIPT2A6NK58 231 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 PAGE4O60829 102 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 PDCD6O75340 191 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 DLK1P80370 383 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 ARRDC1Q8N5I2 433 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 OR2Y1Q8NGV0 311 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 ADAMTS17Q8TE56 1095 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 IGHV3-48P01763 117 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 MMP9P14780 707 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 IGSF11Q5DX21 431 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 OR2C3Q8N628 320 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 ZPLD1Q8TCW7 415 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 COLQQ9Y215 455 aaPredicted RBP11.07□□□□□ -0.64
SPG11-203ENST00000535302 SLC6A1P30531 599 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 CD300CQ08708 224 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 GAPTQ8N292 157 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 FAM216AQ8WUB2 273 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 SLC35B3Q9H1N7 401 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 LRP5O75197 1615 aa11.07□□□□□ -0.64
SPG11-203ENST00000535302 APCSP02743 223 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 SKP2Q13309 424 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 C19orf48Q6RUI8 117 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 DPH3P1Q9H4G8 78 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 TMED3Q9Y3Q3 217 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 PMELP40967 661 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 TMEM33P57088 247 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 COL13A1Q5TAT6 717 aaPredicted RBP11.06□□□□□ -0.64
SPG11-203ENST00000535302 C10orf113Q5VZT2 155 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 OR4B1Q8NGF8 309 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 A0A087X0M5 115 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 A0A1B0GX30 115 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 REG1AP05451 166 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 NUFIP2Q7Z417 695 aaKnown RBP11.06□□□□□ -0.64
SPG11-203ENST00000535302 CBLN2Q8IUK8 224 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 C9orf40Q8IXQ3 194 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 ZNF383Q8NA42 475 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 HARBI1Q96MB7 349 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 MRPL13Q9BYD1 178 aaKnown RBP11.06□□□□□ -0.64
SPG11-203ENST00000535302 RBFOX3A6NFN3 312 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 H3BTX0 84 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 CEACAM3P40198 252 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 CLDN18P56856 261 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 SLC25A40Q8TBP6 338 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 PITPNC1Q9UKF7 332 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 AMMECR1LQ6DCA0 310 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 ZNF441Q8N8Z8 693 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 APOBEC4Q8WW27 367 aaKnown RBP11.06□□□□□ -0.64
SPG11-203ENST00000535302 MEGF10Q96KG7 1140 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 ABHD1Q96SE0 405 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 CCL28Q9NRJ3 127 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 TRPM6Q9BX84 2022 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 TRAV38-1A0A0B4J264 116 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 IGHV3-35A0A0C4DH35 117 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 IGHV3-66A0A0C4DH42 116 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 A0A1W2PPV9 198 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 SNURFLB1AK76 121 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 IGHV3-23P01764 117 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 HERPUD1Q15011 391 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 STARD4Q96DR4 205 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 C16orf92Q96LL3 132 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 MTFP1Q9UDX5 166 aa11.06□□□□□ -0.64
SPG11-203ENST00000535302 PF4V1P10720 104 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 ANKRD55Q3KP44 614 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 DNLZQ5SXM8 178 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms