RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ATP23Q9Y6H3 246 aa9.68□□□□□ -0.86
CLK4-206ENST00000520878 PROB1E7EW31 1015 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 RRP8O43159 456 aaKnown RBP9.67□□□□□ -0.86
CLK4-206ENST00000520878 HLA-GP17693 338 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 CD80P33681 288 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 CXorf66Q5JRM2 361 aaPredicted RBP9.67□□□□□ -0.86
CLK4-206ENST00000520878 Q6ZRG5 221 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 RPRMLQ8N4K4 120 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 LRRC29Q8WV35 223 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 ZFP57Q9NU63 452 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 IL36GQ9NZH8 169 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 SPTBN4Q9H254 2564 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 ANKRD11Q6UB99 2663 aaPredicted RBP9.67□□□□□ -0.86
CLK4-206ENST00000520878 HAND1O96004 215 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 PMELP40967 661 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 EIF2S3P41091 472 aaKnown RBP9.67□□□□□ -0.86
CLK4-206ENST00000520878 ID4P47928 161 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 C20orf204Q6ZNR8 217 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 PURGQ9UJV8 347 aaKnown RBP9.67□□□□□ -0.86
CLK4-206ENST00000520878 TMED3Q9Y3Q3 217 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 IGHV3OR15-7A0A075B7D8 119 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 TRAV24A0A0B4J272 114 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 LRP5LA4QPB2 252 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 FOXI3A8MTJ6 420 aaPredicted RBP9.67□□□□□ -0.86
CLK4-206ENST00000520878 JTBO76095 146 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 KRASP01116 189 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 CEACAM1P13688 526 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 PPT1P50897 306 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 SRPXP78539 464 aa9.67□□□□□ -0.86
CLK4-206ENST00000520878 ZNF816Q0VGE8 651 aaPredicted RBP9.67□□□□□ -0.86
CLK4-206ENST00000520878 ACSF3Q4G176 576 aaPredicted RBP9.67□□□□□ -0.86
CLK4-206ENST00000520878 TMEM182Q6ZP80 229 aaPredicted RBP9.67□□□□□ -0.86
CLK4-206ENST00000520878 DBX1A6NMT0 343 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 PRRG2O14669 202 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 SS18L1O75177 396 aaPredicted RBP9.66□□□□□ -0.86
CLK4-206ENST00000520878 CBR1P16152 277 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 SHEQ5VZ18 495 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 TMEM88Q6PEY1 159 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 CD300LFQ8TDQ1 290 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 ERGIC1Q969X5 290 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 PIGMQ9H3S5 423 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 NUP50Q9UKX7 468 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 AHRRA9YTQ3 701 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 MSTNO14793 375 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 HKR1P10072 659 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 PSG2P11465 335 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 HLA-DRB3P79483 266 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 GLRX5Q86SX6 157 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 NTNG2Q96CW9 530 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 OR51I2Q9H344 312 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 PLEKHA2Q9HB19 425 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 OR2W1Q9Y3N9 320 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 NCOR2Q9Y618 2525 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 MFSD2BA6NFX1 497 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 M0R036 132 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 AQP7O14520 342 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 C1QL1O75973 258 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 RPS2P15880 293 aaKnown RBP9.66□□□□□ -0.86
CLK4-206ENST00000520878 BTNL3Q6UXE8 466 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 ASCL4Q6XD76 172 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 GALMQ96C23 342 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 FAM117AQ9C073 453 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 PLEKHF2Q9H8W4 249 aa9.66□□□□□ -0.86
CLK4-206ENST00000520878 FAM212BQ9NTI7 297 aaPredicted RBP9.66□□□□□ -0.86
CLK4-206ENST00000520878 FAM27E3Q08E93 113 aa9.65□□□□□ -0.86
CLK4-206ENST00000520878 IL24Q13007 206 aa9.65□□□□□ -0.86
CLK4-206ENST00000520878 GFRALQ6UXV0 394 aa9.65□□□□□ -0.86
CLK4-206ENST00000520878 SSX9Q7RTT3 188 aa9.65□□□□□ -0.86
CLK4-206ENST00000520878 Q8IYB0 196 aa9.65□□□□□ -0.86
CLK4-206ENST00000520878 LHFPL5Q8TAF8 219 aa9.65□□□□□ -0.86
CLK4-206ENST00000520878 PLPPR1Q8TBJ4 325 aa9.65□□□□□ -0.86
CLK4-206ENST00000520878 TCTEX1D2Q8WW35 142 aa9.65□□□□□ -0.86
CLK4-206ENST00000520878 CLCF1Q9UBD9 225 aa9.65□□□□□ -0.86
CLK4-206ENST00000520878 K7EM74 188 aa9.65□□□□□ -0.86
CLK4-206ENST00000520878 F12P00748 615 aaPredicted RBP9.65□□□□□ -0.86
CLK4-206ENST00000520878 CRYABP02511 175 aaKnown RBP9.65□□□□□ -0.86
CLK4-206ENST00000520878 TCF15Q12870 199 aa9.65□□□□□ -0.86
CLK4-206ENST00000520878 SAXO1Q8IYX7 474 aa9.65□□□□□ -0.86
CLK4-206ENST00000520878 S100PBPQ96BU1 408 aa9.65□□□□□ -0.86
CLK4-206ENST00000520878 ANAPC10Q9UM13 185 aa9.65□□□□□ -0.86
CLK4-206ENST00000520878 H7C1Q1 480 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 TAAR5O14804 337 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 CHST1O43916 411 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 DEDDO75618 318 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 ZNF14P17017 642 aaPredicted RBP9.65□□□□□ -0.87
CLK4-206ENST00000520878 ZP3P21754 424 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 NFYBP25208 207 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 KRBOX4Q5JUW0 171 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 STX12Q86Y82 276 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 FAM185AQ8N0U4 392 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 OR2C3Q8N628 320 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 OR8G5Q8NG78 346 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 OR52L2PQ8NGH6 319 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 OR1L1Q8NH94 360 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 MRPL30Q8TCC3 161 aaKnown RBP9.65□□□□□ -0.87
CLK4-206ENST00000520878 PHYHIPLQ96FC7 376 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 TMEM222Q9H0R3 208 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 CXXC4Q9H2H0 198 aa9.65□□□□□ -0.87
CLK4-206ENST00000520878 PTPRQQ9UMZ3 2332 aa9.64□□□□□ -0.87
CLK4-206ENST00000520878 TMEM30CPA0ZSE6 113 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms