RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 PRDM6Q9NQX0 595 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 C3orf85A0A1B0GTC6 90 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 UBE2G1P62253 170 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 GNB2P62879 340 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 HIST1H2BAQ96A08 127 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 SF3B5Q9BWJ5 86 aaKnown RBP9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 NAA60Q9H7X0 242 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 GPR27Q9NS67 375 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 CACNG5Q9UF02 275 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 LAMP3Q9UQV4 416 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 CACNA1BQ00975 2339 aa9.45□□□□□ -0.9
PCDHGA1-202ENST00000517417 FAM90A27PA6NNH2 459 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 FGF16O43320 207 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 NDUFA2O43678 99 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 METTL15P1P0C7V9 234 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 PLPPR5Q32ZL2 321 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 ETV3LQ6ZN32 361 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 OR10D4PQ8NGN7 298 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 LOXL4Q96JB6 756 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 CABLES2Q9BTV7 478 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 AGFG2O95081 481 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 LINC00271P0C7V0 271 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 RPS2P15880 293 aaKnown RBP9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 FGF7P21781 194 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 POLR2GP62487 172 aaKnown RBP eCLIP9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 TGIF1Q15583 401 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 ACOT6Q3I5F7 207 aaPredicted RBP9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 FAM206AQ9NX38 181 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 V9GYS6 101 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 PIGYQ3MUY2 71 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 OR4A4PQ8NGN8 299 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 DYRK2Q92630 601 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 RNF126Q9BV68 326 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 GPR35Q9HC97 309 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 KIAA1456Q9P272 454 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 REV3LO60673 3130 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 MOB3BQ86TA1 216 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 ZNF429Q86V71 674 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 GINS3Q9BRX5 216 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 HDHD3Q9BSH5 251 aaPredicted RBP9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 OR2D2Q9H210 308 aa9.44□□□□□ -0.9
PCDHGA1-202ENST00000517417 A0A1W2PPQ1 181 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 NDUFB3O43676 98 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 C1QL1O75973 258 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 CSRP2Q16527 193 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 ADIPOR1Q96A54 375 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 OR2H1Q9GZK4 316 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 WDR54Q9H977 334 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 TMEM14DPA8MWL7 114 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 H0YIZ8 118 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 TSPAN2O60636 221 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 STARD6P59095 220 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 TIGITQ495A1 244 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 KHDC1LQ5JSQ8 128 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 PLAC9Q5JTB6 97 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 POC1AQ8NBT0 407 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 KCNK17Q96T54 332 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 NOTCH3Q9UM47 2321 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 OR5B21A6NL26 309 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 LINC00587B1AMM8 73 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 F8VVB4 439 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 F8VWA3 439 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 DVL1O14640 695 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 HLA-GP17693 338 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 KLF3P57682 345 aaPredicted RBP9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 ZNF90Q03938 601 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 PRR27Q6MZM9 219 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 C17orf78Q8N4C9 275 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 OR2C3Q8N628 320 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 OR2M7Q8NG81 312 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 TAAR6Q96RI8 345 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 SOX7Q9BT81 388 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 MSL2Q9HCI7 577 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 MS4A18H0YCH9 400 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 TRAF3IP2O43734 574 aaPredicted RBP9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 DEDDO75618 318 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 GAPDHP04406 335 aaKnown RBP9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 PGA3P0DJD8 388 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 TNFAIP6P98066 277 aaPredicted RBP9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 MS4A18Q3C1V0 323 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 TMEM108Q6UXF1 575 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 LYZL2Q7Z4W2 148 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 CORO2AQ92828 525 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 TMEM38BQ9NVV0 291 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 MPC1Q9Y5U8 109 aa9.43□□□□□ -0.9
PCDHGA1-202ENST00000517417 TRBV23-1A0A0A0MS06 115 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 CDRT15L2A8MXV6 281 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 C21orf140B9A014 251 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 ADCYAP1P18509 176 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 FAM3AP98173 230 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 ENDOGQ14249 297 aaKnown RBP9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 LRRC10Q5BKY1 277 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 PRUNE2Q8WUY3 3088 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 DENND4CQ5VZ89 1909 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 A0A1W2PQM1 296 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 CST2P09228 141 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 SEC11BP0C7V7 166 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 IL13RA2Q14627 380 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 BIVMQ86UB2 503 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 KLHDC3Q9BQ90 382 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms