RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 AQP7P3A6NL99 342 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 A8MWP6 167 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 ZNF814B7Z6K7 855 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 E9PLN8 166 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 MPPED1O15442 326 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 PITX3O75364 302 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 CD33P20138 364 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 SPANXN5Q5MJ07 72 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 SDSLQ96GA7 329 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 SCRT1Q9BWW7 348 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 TRIOBPQ9H2D6 2365 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 TRAPPC6AO75865 159 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 BCL2P10415 239 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 WNT5AP41221 380 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 ZNF506Q5JVG8 444 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 OR1K1Q8NGR3 316 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 IFI44Q8TCB0 444 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 RHBDD1Q8TEB9 315 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 SPTSSAQ969W0 71 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 OR51I2Q9H344 312 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 SLC25A22Q9H936 323 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 FKBP11Q9NYL4 201 aa8.33□□□□□ -1.08
VCAN-210ENST00000513960 A0A087WWC5 75 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 ZNF320A2RRD8 509 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 MAP1LC3B2A6NCE7 125 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 CD300LBA8K4G0 201 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 PPYP01298 95 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 FAM3BP58499 235 aaPredicted RBP8.32□□□□□ -1.08
VCAN-210ENST00000513960 BSXQ3C1V8 233 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 GAPTQ8N292 157 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 ZNF845Q96IR2 970 aaPredicted RBP8.32□□□□□ -1.08
VCAN-210ENST00000513960 MAP1LC3BQ9GZQ8 125 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 RPRMQ9NS64 109 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 PRSS50Q9UI38 385 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 DVL1O14640 695 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 IL11RAQ14626 422 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 MRPL14Q6P1L8 145 aaKnown RBP8.32□□□□□ -1.08
VCAN-210ENST00000513960 BTNL3Q6UXE8 466 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 ZNF100Q8IYN0 542 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 GJC3Q8NFK1 279 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 MS4A10Q96PG2 267 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 NUDT16L1Q9BRJ7 211 aaKnown RBP8.32□□□□□ -1.08
VCAN-210ENST00000513960 VSIRQ9H7M9 311 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 PARD6AQ9NPB6 346 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 SLC7A10Q9NS82 523 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 PAM16Q9Y3D7 125 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 CHCHD2Q9Y6H1 151 aaPredicted RBP8.32□□□□□ -1.08
VCAN-210ENST00000513960 MAP1BP46821 2468 aaKnown RBP8.32□□□□□ -1.08
VCAN-210ENST00000513960 LY6G6EA0A0G2JKS1 128 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 UBE2L5PA0A1B0GUS4 154 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 LOC102723971A0A1B0GUV8 181 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 CEACAM18A8MTB9 384 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 TRDCB7Z8K6 153 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 PDGFBP01127 241 aaPredicted RBP8.32□□□□□ -1.08
VCAN-210ENST00000513960 MSR1P21757 451 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 LBHQ53QV2 105 aaPredicted RBP8.32□□□□□ -1.08
VCAN-210ENST00000513960 RAB24Q969Q5 203 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 TBX15Q96SF7 602 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 SNHG12Q9BXW3 62 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 ULBP2Q9BZM5 246 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 SMDT1Q9H4I9 107 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 WDR54Q9H977 334 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 U3KQA8 63 aa8.32□□□□□ -1.08
VCAN-210ENST00000513960 ZNF737O75373 536 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 CELA2AP08217 269 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 CYC1P08574 325 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 CD81P60033 236 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 CNN3Q15417 329 aaKnown RBP8.31□□□□□ -1.08
VCAN-210ENST00000513960 EXT1Q16394 746 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 TMEM241Q24JQ0 296 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 FAM78BQ5VT40 261 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 OSR2Q8N2R0 312 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 FADS6Q8N9I5 356 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 AGBL5Q8NDL9 886 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 OR5R1Q8NH85 324 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 ATP5SQ99766 215 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 RBKSQ9H477 322 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 CCL28Q9NRJ3 127 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 FBLN5Q9UBX5 448 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 ESPL1Q14674 2120 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 GDF9O60383 454 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 FGF5P12034 268 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 SSR4P51571 173 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 PNRC1Q12796 327 aaPredicted RBP8.31□□□□□ -1.08
VCAN-210ENST00000513960 OR5I1Q13606 314 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 PCOLCEQ15113 449 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 SLC25A26Q70HW3 274 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 MSI2Q96DH6 328 aaKnown RBP8.31□□□□□ -1.08
VCAN-210ENST00000513960 FAM103A1Q9BTL3 118 aaKnown RBP8.31□□□□□ -1.08
VCAN-210ENST00000513960 SAMD10Q9BYL1 202 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 DIDO1Q9BTC0 2240 aaKnown RBP8.31□□□□□ -1.08
VCAN-210ENST00000513960 SPEGQ15772 3267 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 TMEM265A0A087WTH1 108 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 B4DEV8 164 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 PROB1E7EW31 1015 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 TCF21O43680 179 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 VAMP5O95183 116 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 EDN3P14138 238 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 UBE2G2P60604 165 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 SRPXP78539 464 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms