RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 TMEM106BQ9NUM4 274 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 ANXA10Q9UJ72 324 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 HIGD1AQ9Y241 93 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 IGKV3-7A0A075B6H7 116 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 hCG_38984A0A1B0GV85 526 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 HRKO00198 91 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 MMP7P09237 267 aaPredicted RBP3.69□□□□□ -1.82
VCAN-209ENST00000513016 CD37P11049 281 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 NPY1RP25929 384 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 CDC34P49427 236 aaPredicted RBP3.69□□□□□ -1.82
VCAN-209ENST00000513016 TMEM33P57088 247 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 SPCS3P61009 180 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 UBE2L3P68036 154 aaKnown RBP3.69□□□□□ -1.82
VCAN-209ENST00000513016 CYB5R2Q6BCY4 276 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 C5orf17Q8NAS9 161 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 C8orf46Q8TAG6 207 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 C16orf92Q96LL3 132 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 GAB2Q9UQC2 676 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 V9GYS6 101 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 FXYD1O00168 92 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 GREM1O60565 184 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 SMIM10L1P0DMW3 83 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 PPOXP50336 477 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 P2RX3P56373 397 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 TPPP2P59282 170 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 ZNF343Q6P1L6 599 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 ALKAL2Q6UX46 152 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 BVESQ8NE79 360 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 OR4P4Q8NGL7 312 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 OR4X1Q8NH49 305 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 DTD1Q8TEA8 209 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 SMIM10Q96HG1 83 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 TNFRSF12AQ9NP84 129 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 JPT1Q9UK76 154 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 URGCP-MRPS24S4R325 110 aa3.69□□□□□ -1.82
VCAN-209ENST00000513016 SCGB1D1O95968 90 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 CPN1P15169 458 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 IGLV3-21P80748 117 aaPredicted RBP3.68□□□□□ -1.82
VCAN-209ENST00000513016 ZFP36L1Q07352 338 aaKnown RBP3.68□□□□□ -1.82
VCAN-209ENST00000513016 AESQ08117 197 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 BAMBIQ13145 260 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 EIF4EBP2Q13542 120 aaPredicted RBP3.68□□□□□ -1.82
VCAN-209ENST00000513016 HLXQ14774 488 aaPredicted RBP3.68□□□□□ -1.82
VCAN-209ENST00000513016 COX19Q49B96 90 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 C10orf113Q5VZT2 155 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 FAM122BQ7Z309 247 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 TMEM52Q8NDY8 209 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 LILRB4Q8NHJ6 448 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 BLNKQ8WV28 456 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 TMEM18Q96B42 140 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 ZNF703Q9H7S9 590 aaPredicted RBP3.68□□□□□ -1.82
VCAN-209ENST00000513016 MRM2Q9UI43 246 aaKnown RBP3.68□□□□□ -1.82
VCAN-209ENST00000513016 KLK13Q9UKR3 277 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 OR51B2Q9Y5P1 312 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 MYH7BA7E2Y1 1941 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 EVPLQ92817 2033 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 A0A0B4J293 547 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 IGSF23A1L1A6 192 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 HELTA6NFD8 242 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 DHRS7CA6NNS2 312 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 ZNF705GA8MUZ8 300 aaPredicted RBP3.68□□□□□ -1.82
VCAN-209ENST00000513016 UBE2L6O14933 153 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 SYNGR2O43760 224 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 ZFPL1O95159 310 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 ERVFC1-1P60608 527 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 HERVK_113P61574 105 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 SNRPD3P62318 126 aaKnown RBP3.68□□□□□ -1.82
VCAN-209ENST00000513016 RIGQ13278 110 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 RNF212Q495C1 297 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 ACSF3Q4G176 576 aaPredicted RBP3.68□□□□□ -1.82
VCAN-209ENST00000513016 TMEM78Q5T7P6 136 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 OR4A47Q6IF82 309 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 SLC16A13Q7RTY0 426 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 BAP18Q8IXM2 172 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 ADIPOR1Q96A54 375 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 G3V3Q6 166 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 ERVH48-1M5A8F1 160 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 HYPMO75409 117 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 SIX6O95475 246 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 HTN1P15515 57 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 TOR2AQ5JU69 321 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 ZNF385CQ66K41 422 aaPredicted RBP3.68□□□□□ -1.82
VCAN-209ENST00000513016 FAM166AQ6J272 317 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 C12orf54Q6X4T0 127 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 ZG16BQ96DA0 208 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 MTFP1Q9UDX5 166 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 TMEM56-RWDD3S4R434 201 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 PDE4DIPQ5VU43 2346 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 NPIPB11E5RHQ5 1161 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 NAT2P11245 290 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 PTGDSP41222 190 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 UQCRFS1P47985 274 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 EIF4E3Q8N5X7 224 aaKnown RBP3.68□□□□□ -1.82
VCAN-209ENST00000513016 SLC24A4Q8NFF2 622 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 KLF14Q8TD94 323 aaPredicted RBP3.68□□□□□ -1.82
VCAN-209ENST00000513016 SLC25A32Q9H2D1 315 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 DPM3Q9P2X0 92 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 TSTD3H0UI37 97 aa3.68□□□□□ -1.82
VCAN-209ENST00000513016 MBPP02686 304 aaPredicted RBP3.68□□□□□ -1.82
VCAN-209ENST00000513016 FCER1GP30273 86 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms