RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	SIRPD	Q9H106	197 aa		6.15	□□□□□ -1.42
NR1I3-231	ENST00000512340	ZNF696	Q9H7X3	374 aa		6.15	□□□□□ -1.42
NR1I3-231	ENST00000512340	C19orf12	Q9NSK7	152 aa		6.15	□□□□□ -1.42
NR1I3-231	ENST00000512340	STEAP1	Q9UHE8	339 aa		6.15	□□□□□ -1.42
NR1I3-231	ENST00000512340	MGAT4A	Q9UM21	535 aa		6.15	□□□□□ -1.42
NR1I3-231	ENST00000512340	LOC100506127	A0A0U1RQW1	187 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340		A0A1B0GW55	424 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	TMEM82	A0PJX8	343 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	HSPB6	O14558	160 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	GEMIN2	O14893	280 aa	Known RBP	6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	NPFF	O15130	113 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	PIN1P1	O15428	100 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	SPINT2	O43291	252 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	PSPN	O60542	156 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	PDCD6	O75340	191 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	RBBP9	O75884	186 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	CLPX	O76031	633 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	MPIG6B	O95866	241 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	AVP	P01185	164 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	FSHB	P01225	129 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	LPL	P06858	475 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	DUX4L2	P0CJ85	424 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	DUX4L3	P0CJ86	424 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	DUX4L4	P0CJ87	422 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	DUX4L5	P0CJ88	424 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	DUX4L6	P0CJ89	424 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	DUX4L7	P0CJ90	424 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	MMP9	P14780	707 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	CD36	P16671	472 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	RBMX	P38159	391 aa	Known RBP	6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	HTR2B	P41595	481 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	GLP1R	P43220	463 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	OR3A1	P47881	315 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	HOXA1	P49639	335 aa	Predicted RBP	6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	HILS1	P60008	231 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	AES	Q08117	197 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	ATXN7L3	Q14CW9	347 aa	Predicted RBP	6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	TAF9	Q16594	264 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	PIGY	Q3MUY2	71 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	C22orf42	Q6IC83	251 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	SLC35E4	Q6ICL7	350 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	RAB12	Q6IQ22	244 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340		Q6P435	159 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	DUX4L9	Q6RFH8	374 aa	Predicted RBP	6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	TMEM91	Q6ZNR0	172 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	LRRTM1	Q86UE6	522 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	TMEM86B	Q8N661	226 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	SUMF2	Q8NBJ7	301 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	OR4S1	Q8NGB4	309 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	OR10A7	Q8NGE5	316 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	OR56B1	Q8NGI3	324 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	ZNF596	Q8TC21	504 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	CHAC2	Q8WUX2	184 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	SSMEM1	Q8WWF3	244 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	CORO2A	Q92828	525 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	ORAI1	Q96D31	301 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	TBX15	Q96SF7	602 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	SLC6A7	Q99884	636 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	RIMS4	Q9H426	269 aa	Predicted RBP	6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	SIRT7	Q9NRC8	400 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	PLEKHJ1	Q9NW61	149 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	DUX4	Q9UBX2	424 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	RSL24D1	Q9UHA3	163 aa	Known RBP	6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	RAB22A	Q9UL26	194 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	TRAPPC2L	Q9UL33	140 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	PEX16	Q9Y5Y5	336 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	POMT1	Q9Y6A1	747 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	SESN1	Q9Y6P5	492 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	KIAA2026	Q5HYC2	2103 aa		6.14	□□□□□ -1.43
NR1I3-231	ENST00000512340	IGHV3OR16-10	A0A075B7F0	116 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	CENPVL3	A0A0U1RRI6	287 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	MEIOC	A2RUB1	952 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	CCDC160	A6NGH7	325 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	C17orf98	A8MV24	154 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	FAM25A	B3EWG3	89 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	FAM25C	B3EWG5	89 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	FAM25G	B3EWG6	89 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	AIP	O00170	330 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	CIDEA	O60543	219 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	NOL3	O60936	208 aa	Known RBP	6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	RGS11	O94810	467 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	TFF1	P04155	84 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	IGHV1-8	P0DP01	117 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	IGHV4-38-2	P0DP08	117 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	RPS27A	P62979	156 aa	Known RBP	6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	ACTG1	P63261	375 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	PAX5	Q02548	391 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	SSX1	Q16384	188 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	NKAPL	Q5M9Q1	402 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	FAM27D1	Q5T7N8	215 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	HES5	Q5TA89	166 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	ASPHD2	Q6ICH7	369 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	HEPN1	Q6WQI6	88 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	C1orf229	Q6ZS94	237 aa	Predicted RBP	6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	SLC16A12	Q6ZSM3	486 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	MOB1B	Q7L9L4	216 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	OR5R1	Q8NH85	324 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	CAPSL	Q8WWF8	208 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	FAM46B	Q96A09	425 aa		6.13	□□□□□ -1.43
NR1I3-231	ENST00000512340	FAM3D	Q96BQ1	224 aa		6.13	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms