RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 LOC102724200A0A096LPH7 203 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 IGHV5-51A0A0C4DH38 117 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 A0A1W2PP18 115 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 MEGF11A6BM72 1044 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 C1orf196B1AJZ1 125 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 MRASO14807 208 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 TNFRSF13BO14836 293 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 STATHP02808 62 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 CRYBA1P05813 215 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZFP36L2P47974 494 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 LSM3P62310 102 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 RPL8P62917 257 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 MRPS10P82664 201 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 FMODQ06828 376 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 DEFB110Q30KQ9 67 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF672Q499Z4 452 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 TMEM78Q5T7P6 136 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF66Q6ZN08 573 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF620Q6ZNG0 422 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 NAA40Q86UY6 237 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 OOSP2Q86WS3 158 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 BAP18Q8IXM2 172 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR2L13Q8N349 312 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 TMEM99Q8N816 258 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 LINC01555Q8NAE3 123 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 SCCPDHQ8NBX0 429 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR4F17Q8NGA8 305 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR10G4Q8NGN3 311 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR2T4Q8NH00 348 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR4F5Q8NH21 305 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF502Q8TBZ5 544 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 PTX4Q96A99 478 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 MRPS24Q96EL2 167 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 MOCOSQ96EN8 888 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 SLC35G5Q96KT7 338 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR4F4Q96R69 305 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 RASL11BQ9BPW5 248 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 MARVELD1Q9BSK0 173 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 VN1R1Q9GZP7 353 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 RNF122Q9H9V4 155 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 OCIAD1Q9NX40 245 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 MARCOQ9UEW3 520 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 KCNS2Q9ULS6 477 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 HEBP2Q9Y5Z4 205 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 USP24Q9UPU5 2620 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 A0A096LPK6 155 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF816-ZNF321PA0A0X1KG74 233 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 A0A1W2PNU3 283 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 B5MCH6 92 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 DEGS1O15121 323 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 MPC2O95563 127 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 HIST1H1BP16401 226 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 HTR1DP28221 377 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 HOXD3P31249 432 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 GGT2P36268 569 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 RPL3P39023 403 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 GDF5P43026 501 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 GLIPR1P48060 266 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 CLDN17P56750 224 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 SMAGPQ0VAQ4 97 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 NHLRC3Q5JS37 347 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 LCN10Q6JVE6 187 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 KIRREL2Q6UWL6 708 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 ADAMTSL5Q6ZMM2 481 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZMYND19Q96E35 227 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 DIRAS2Q96HU8 199 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 NODALQ96S42 347 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF649Q9BS31 505 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 ADGRL4Q9HBW9 690 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 DOK5Q9P104 306 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 RCC2Q9P258 522 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 TAC3Q9UHF0 121 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 SLC7A7Q9UM01 511 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 RFNGQ9Y644 331 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 KIF26BQ2KJY2 2108 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 AHCTF1Q8WYP5 2266 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 PKD1L2Q7Z442 2459 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 A0A0G2JN53 185 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 A0A1W2PPI3 338 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 ADARB2-AS1A8MUL3 147 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 NTN3O00634 580 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 FABP7O15540 132 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 HCRTR1O43613 425 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 TMPRSS11DO60235 418 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 C6orf47O95873 294 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 MPC1LP0DKB6 136 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 ACP2P11117 423 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 HSD17B1P14061 328 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 FGF7P21781 194 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 RAB5CP51148 216 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 BIDP55957 195 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 HILS1P60008 231 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 SUMO2P61956 95 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 SNRPNP63162 240 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 DGCR2P98153 550 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 FABP9Q0Z7S8 132 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 RAB40BQ12829 278 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 UBE2V2Q15819 145 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 ATP6AP1LQ52LC2 224 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 SLC25A48Q6ZT89 311 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms