RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 FAM166AQ6J272 317 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 ZNF595Q8IYB9 648 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 ZNF433Q8N7K0 673 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 OR2I1PQ8NGU4 316 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 SLC38A5Q8WUX1 472 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 ZBTB45Q96K62 511 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 C1QTNF4Q9BXJ3 329 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 SAMD10Q9BYL1 202 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 STRADBQ9C0K7 418 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 SIGLEC8Q9NYZ4 499 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 CRLS1Q9UJA2 301 aa9.32□□□□□ -0.92
PDLIM5-210ENST00000508216 TRBV5-7A0A0A0MS05 114 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 TRBV9A0A0B4J1U6 114 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 C7orf71A4D174 169 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 TMEM250H0YL14 139 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 C15orf65H3BRN8 121 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 TNFP01375 233 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 CATP04040 527 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 NPY1RP25929 384 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 GRPRP30550 384 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 CCR2P41597 374 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 KIR2DL2P43627 348 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 FASLGP48023 281 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 RUNX3Q13761 415 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 IL13RA2Q14627 380 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 HLA-DRB5Q30154 266 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 TMEM97Q5BJF2 176 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 OR10J3Q5JRS4 329 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 RPTNQ6XPR3 784 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 C8orf86Q6ZUL3 223 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 DEFB106AQ8N104 65 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 DTWD2Q8NBA8 298 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 OR5H2Q8NGV7 314 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 NRTNQ99748 197 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 SPIN2AQ99865 258 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 SPIN2BQ9BPZ2 258 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 PMCHL2Q9BQD1 86 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 HCAR1Q9BXC0 346 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 TMEM126AQ9H061 195 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 NXF5Q9H1B4 397 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 NRN1Q9NPD7 142 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 CCNL1Q9UK58 526 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 WASHC3Q9Y3C0 194 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 GREB1Q4ZG55 1949 aa9.31□□□□□ -0.92
PDLIM5-210ENST00000508216 SCN1AP35498 2009 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 MUC21A0A0G2JKD1 596 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 MUC21A0A140T8X8 626 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 A0A1W2PQM1 296 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 FAM231BA6NCW3 169 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 B5MCH6 92 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 FAM72CH0Y354 149 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 SLC17A2O00624 439 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 AGFG2O95081 481 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 ADH4P08319 380 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 ZNF728P0DKX0 622 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 CRISP2P16562 243 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 ZNF17P17021 662 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 CD33P20138 364 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 KIR2DS4P43632 304 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 SOX2P48431 317 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 GRB2P62993 217 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 TUSC3Q13454 348 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 NFATC4Q14934 902 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 VAX1Q5SQQ9 334 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 MUC21Q5SSG8 566 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 TMEM78Q5T7P6 136 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 FAM72AQ5TYM5 149 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 FAM72DQ6L9T8 149 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 FAM72BQ86X60 149 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 OR2G3Q8NGZ4 309 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 C16orf52Q8NHV5 167 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 PPTC7Q8NI37 304 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 PLPPR1Q8TBJ4 325 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 MRAPQ8TCY5 172 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 IGSF8Q969P0 613 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 TMEM230Q96A57 120 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 ZG16BQ96DA0 208 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 TNFRSF13CQ96RJ3 184 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 COMMD5Q9GZQ3 224 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 LYRM4Q9HD34 91 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 ERRFI1Q9UJM3 462 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 ANAPC10Q9UM13 185 aa9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 ZNF443Q9Y2A4 671 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-210ENST00000508216 A0A1W2PPK0 400 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 MYADML2A6NDP7 307 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 P2RY10O00398 339 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 NKX2-8O15522 239 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 DUX1O43812 170 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 CELA3AP09093 270 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 PGFP49763 221 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 PAX9P55771 341 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 TCL1AP56279 114 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 TAS2R46P59540 309 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 KRTDAPP60985 99 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 RPL23P62829 140 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 ZXDAP98168 799 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 FUT7Q11130 342 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 FRG2Q64ET8 278 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 ASPHD2Q6ICH7 369 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 MOB1BQ7L9L4 216 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms