RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 SELENOKQ9Y6D0 94 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 ICE1Q9Y2F5 2266 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 CEP250Q9BV73 2442 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 LOC102724200A0A096LPH7 203 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-208ENST00000504387 IGKV1-12A0A0C4DH73 117 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 UBE2L5PA0A1B0GUS4 154 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF320A2RRD8 509 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 KIAA1324LA8MWY0 1029 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-208ENST00000504387 AQP7O14520 342 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 HS3ST1O14792 307 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 CYB5R3P00387 301 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-208ENST00000504387 IGKV1D-12P01611 117 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 HSPB1P04792 205 aaKnown RBP6.57□□□□□ -1.36
NEDD9-208ENST00000504387 NUBP1P53384 320 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 ARSJQ5FYB0 599 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF506Q5JVG8 444 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 SLC25A26Q70HW3 274 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF100Q8IYN0 542 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 FAM89BQ8N5H3 189 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF845Q96IR2 970 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-208ENST00000504387 PRSS50Q9UI38 385 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 DKKL1Q9UK85 242 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 GPR179Q6PRD1 2367 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 LOC102723971A0A1B0GUV8 181 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 A0A1B0GWJ7 208 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 DUX1O43812 170 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF737O75373 536 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 SUCLG1P53597 346 aaKnown RBP6.57□□□□□ -1.36
NEDD9-208ENST00000504387 ARL16Q0P5N6 197 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF726P1Q15940 193 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 THEM4Q5T1C6 240 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF774Q6NX45 483 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 Q6ZPA2 131 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 SLC35E3Q7Z769 313 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 ODF3L1Q8IXM7 274 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 NOXO1Q8NFA2 376 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 OR51G1Q8NGK1 321 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 VN1R17PQ8TDU5 208 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 MS4A10Q96PG2 267 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 RIMS4Q9H426 269 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-208ENST00000504387 SDF2L1Q9HCN8 221 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 PARD6AQ9NPB6 346 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 SLC39A9Q9NUM3 307 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 PPP1R3CQ9UQK1 317 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 DSPP15924 2871 aaKnown RBP6.56□□□□□ -1.36
NEDD9-208ENST00000504387 C1QTNF9BB2RNN3 333 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 DHRS3O75911 302 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 BCL2P10415 239 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 SFTPCP11686 197 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 HNRNPKP61978 463 aaKnown RBP eCLIP6.56□□□□□ -1.362e-6■□□□□ 10.5
NEDD9-208ENST00000504387 IGLV3-21P80748 117 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF92Q03936 586 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 ZFP36L1Q07352 338 aaKnown RBP6.56□□□□□ -1.36
NEDD9-208ENST00000504387 ARL6IP1Q15041 203 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 BSXQ3C1V8 233 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 OR4D5Q8NGN0 318 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 OR1N1Q8NGS0 311 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 OR10J5Q8NHC4 309 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 RDH5Q92781 318 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 TMEM18Q96B42 140 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 Q96M66 194 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 CCNL2Q96S94 520 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-208ENST00000504387 DEFB126Q9BYW3 111 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 AKIRIN1Q9H9L7 192 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-208ENST00000504387 C2orf16Q68DN1 1984 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 FREM1Q5H8C1 2179 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 ZFHX4Q86UP3 3567 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 MAP1LC3B2A6NCE7 125 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 TRDCB7Z8K6 153 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 RBMXL2O75526 392 aaKnown RBP6.56□□□□□ -1.36
NEDD9-208ENST00000504387 CELA2AP08217 269 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 THBS3P49746 956 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 PLCXD3Q63HM9 321 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 DPPA3Q6W0C5 159 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 SLC16A14Q7RTX9 510 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 PLXDC1Q8IUK5 500 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 ST6GALNAC3Q8NDV1 305 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 RCC1LQ96I51 464 aaKnown RBP6.56□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF488Q96MN9 340 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 MAP1LC3BQ9GZQ8 125 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 PNRC2Q9NPJ4 139 aaKnown RBP6.56□□□□□ -1.36
NEDD9-208ENST00000504387 POLR3KQ9Y2Y1 108 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-208ENST00000504387 USF3Q68DE3 2245 aa6.56□□□□□ -1.36
NEDD9-208ENST00000504387 A0A087WWC5 75 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 B4GALT1P15291 398 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 GCH1P30793 250 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 OR3A1P47881 315 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 TDGF1P3P51864 188 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 MALLQ13021 153 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 TMEM241Q24JQ0 296 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 SELENOHQ8IZQ5 122 aaKnown RBP6.55□□□□□ -1.36
NEDD9-208ENST00000504387 OR5R1Q8NH85 324 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 ALKBH3Q96Q83 286 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-208ENST00000504387 ATP5SQ99766 215 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 LYRM2Q9NU23 88 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-208ENST00000504387 THADAQ6YHU6 1953 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 LOC400499M0QZD8 3231 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 DNAJC13O75165 2243 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 ADAMTS9Q9P2N4 1935 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 MARCH11A6NNE9 402 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms