RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 SLC10A1Q14973 349 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SIX1Q15475 284 aaPredicted RBP3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 HLA-DRB5Q30154 266 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CHRFAM7AQ494W8 412 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TRIQKQ629K1 86 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 UFSP1Q6NVU6 142 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 WDR74Q6RFH5 385 aaPredicted RBP3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 S100A7AQ86SG5 101 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SLC51BQ86UW2 128 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 P2RY8Q86VZ1 359 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 NIT1Q86X76 327 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CHST4Q8NCG5 386 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OR10G3Q8NGC4 313 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OR10W1Q8NGF6 305 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OR52E4Q8NGH9 312 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 NT5CQ8TCD5 201 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 PIFOQ8TCI5 191 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SLC35B4Q969S0 331 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 IMP4Q96G21 291 aaKnown RBP3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 MAGEB18Q96M61 343 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SMIM14Q96QK8 99 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 PHB2Q99623 299 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 RIOK2Q9BVS4 552 aaKnown RBP3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CLEC7AQ9BXN2 247 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ARV1Q9H2C2 271 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 MAP1LC3AQ9H492 121 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 RPF2Q9H7B2 306 aaKnown RBP3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 C12orf10Q9HB07 376 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TREM2Q9NZC2 230 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 DNAJC27Q9NZQ0 273 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TP53TG1Q9Y2A0 90 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 PLXNA2O75051 1894 aa3.3□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TDRD6O60522 2096 aaKnown RBP3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TP53BP1Q12888 1972 aaPredicted RBP3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ZFYVE26Q68DK2 2539 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 MAP1BP46821 2468 aaKnown RBP3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ZZEF1O43149 2961 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 APC2O95996 2303 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TRAV8-4A0A0B4J246 113 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TRAV39A0A0B4J263 110 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 A0A1B0GV72 72 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CEACAM18A8MTB9 384 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 FAM220BPB1ANY3 271 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 C12orf77C9JDV5 145 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TCAPO15273 167 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 HCRTR1O43613 425 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CTNSO60931 367 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 P01737 135 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 HLA-DQB2P05538 268 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 HCKP08631 526 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ZNF806P0C7X5 589 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ADRB3P13945 408 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ZNF17P17021 662 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 RCC1P18754 421 aaPredicted RBP3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TTPAP49638 278 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 VEGFCP49767 419 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SULT1A1P50225 295 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SULT1A2P50226 295 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CDK9P50750 372 aaKnown RBP3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 GTF2A1P52655 376 aaPredicted RBP3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 APOC4P55056 127 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TCL1AP56279 114 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SPCS3P61009 180 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 PSME3P61289 254 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SELENOTP62341 195 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 GNB1P62873 340 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 IL5RAQ01344 420 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 FAM53BQ14153 422 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 QPRTQ15274 297 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TOMM34Q15785 309 aaPredicted RBP3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 FAM53AQ6NSI3 398 aaPredicted RBP3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ZNF544Q6NX49 715 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 LYG2Q86SG7 212 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 KRTAP7-1Q8IUC3 87 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SLC34A3Q8N130 599 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OR51D1Q8NGF3 324 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OR11L1Q8NGX0 322 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CHCHD10Q8WYQ3 142 aaPredicted RBP3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TAF15Q92804 592 aaKnown RBP eCLIP3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 RERGQ96A58 199 aaPredicted RBP3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SMIM12Q96EX1 92 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ATXN7L3BQ96GX2 97 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 C18orf12Q96KH6 178 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 RNF126Q9BV68 326 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 C20orf85Q9H1P6 137 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ISG20L2Q9H9L3 353 aaKnown RBP3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 C12orf4Q9NQ89 552 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 DIABLOQ9NR28 239 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 RBM22Q9NW64 420 aaKnown RBP eCLIP3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 IMPAD1Q9NX62 359 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ANXA10Q9UJ72 324 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ZNF391Q9UJN7 358 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 FBXO5Q9UKT4 447 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 PSG11Q9UQ72 335 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ST3GAL6Q9Y274 331 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 FREM2Q5SZK8 3169 aa3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 DSPP15924 2871 aaKnown RBP3.29□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ACACAQ13085 2346 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TMEM131Q92545 1883 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms