RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 C6orf62Q9GZU0 229 aaPredicted RBP16.47■□□□□ 0.23
CTSD-206ENST00000497544 RIMS4Q9H426 269 aaPredicted RBP16.47■□□□□ 0.23
CTSD-206ENST00000497544 TAS2R3Q9NYW6 316 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 ADAM30Q9UKF2 790 aa16.47■□□□□ 0.23
CTSD-206ENST00000497544 SVEP1Q4LDE5 3571 aa16.46■□□□□ 0.23
CTSD-206ENST00000497544 TRAV39A0A0B4J263 110 aa16.46■□□□□ 0.23
CTSD-206ENST00000497544 MFNGO00587 321 aa16.46■□□□□ 0.23
CTSD-206ENST00000497544 XRCC3O43542 346 aa16.46■□□□□ 0.23
CTSD-206ENST00000497544 TOX4O94842 621 aa16.46■□□□□ 0.23
CTSD-206ENST00000497544 ELK1P19419 428 aa16.46■□□□□ 0.23
CTSD-206ENST00000497544 OLFML2AQ68BL7 652 aa16.46■□□□□ 0.23
CTSD-206ENST00000497544 C1orf122Q6ZSJ8 110 aa16.46■□□□□ 0.23
CTSD-206ENST00000497544 KIR3DL3Q8N743 410 aa16.46■□□□□ 0.23
CTSD-206ENST00000497544 DTX3Q8N9I9 347 aa16.46■□□□□ 0.23
CTSD-206ENST00000497544 MRGPRDQ8TDS7 321 aa16.46■□□□□ 0.23
CTSD-206ENST00000497544 PCGF1Q9BSM1 259 aa16.46■□□□□ 0.23
CTSD-206ENST00000497544 GAL3ST2Q9H3Q3 398 aa16.46■□□□□ 0.23
CTSD-206ENST00000497544 KCNK7Q9Y2U2 307 aa16.46■□□□□ 0.23
CTSD-206ENST00000497544 ZNF729A6NN14 1252 aaPredicted RBP16.45■□□□□ 0.22
CTSD-206ENST00000497544 GSTP1P09211 210 aaKnown RBP16.45■□□□□ 0.22
CTSD-206ENST00000497544 TALDO1P37837 337 aa16.45■□□□□ 0.22
CTSD-206ENST00000497544 MNDAP41218 407 aa16.45■□□□□ 0.22
CTSD-206ENST00000497544 ZNF260Q3ZCT1 412 aa16.45■□□□□ 0.22
CTSD-206ENST00000497544 TMEM69Q5SWH9 247 aa16.45■□□□□ 0.22
CTSD-206ENST00000497544 IZUMO1Q8IYV9 350 aa16.45■□□□□ 0.22
CTSD-206ENST00000497544 GAPTQ8N292 157 aa16.45■□□□□ 0.22
CTSD-206ENST00000497544 OR13A1Q8NGR1 328 aa16.45■□□□□ 0.22
CTSD-206ENST00000497544 SETD6Q8TBK2 473 aa16.45■□□□□ 0.22
CTSD-206ENST00000497544 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.45■□□□□ 0.22
CTSD-206ENST00000497544 KCNIP1Q9NZI2 227 aa16.45■□□□□ 0.22
CTSD-206ENST00000497544 PNLIPRP3Q17RR3 467 aa16.44■□□□□ 0.22
CTSD-206ENST00000497544 TCF23Q7RTU1 214 aa16.44■□□□□ 0.22
CTSD-206ENST00000497544 MRPL30Q8TCC3 161 aaKnown RBP16.44■□□□□ 0.22
CTSD-206ENST00000497544 HDHD3Q9BSH5 251 aaPredicted RBP16.44■□□□□ 0.22
CTSD-206ENST00000497544 C19orf24Q9BVV8 132 aa16.44■□□□□ 0.22
CTSD-206ENST00000497544 NXF2Q9GZY0 626 aaKnown RBP16.44■□□□□ 0.22
CTSD-206ENST00000497544 SIRPDQ9H106 197 aa16.44■□□□□ 0.22
CTSD-206ENST00000497544 MMP27Q9H306 513 aa16.44■□□□□ 0.22
CTSD-206ENST00000497544 MRPS7Q9Y2R9 242 aaKnown RBP16.44■□□□□ 0.22
CTSD-206ENST00000497544 KBTBD11-OT1A0A1B0GTJ5 212 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 C17orf98A8MV24 154 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 AVPP01185 164 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 DLX6P56179 175 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 GNG2P59768 71 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 PITPNAQ00169 270 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 C6orf183Q5T699 404 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 HACD4Q5VWC8 232 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 TRAT1Q6PIZ9 186 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 Q8N7P7 452 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 ARL11Q969Q4 196 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 METTL8Q9H825 291 aaKnown RBP16.43■□□□□ 0.22
CTSD-206ENST00000497544 RAB9BQ9NP90 201 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 C12orf4Q9NQ89 552 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 EXTL2Q9UBQ6 330 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 OPN4Q9UHM6 478 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 A3GALT2U3KPV4 340 aa16.43■□□□□ 0.22
CTSD-206ENST00000497544 TRBV6-6A0A0A6YYG2 114 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 TMEM235A6NFC5 223 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 POM121CA8CG34 1229 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 ORC5O43913 435 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 NAPSAO96009 420 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 CGB3P0DN86 165 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 CGB7P0DN87 165 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 MMP9P14780 707 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 RCC1P18754 421 aaPredicted RBP16.42■□□□□ 0.22
CTSD-206ENST00000497544 HNF1AP20823 631 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 PRTN3P24158 256 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 TAS2R20P59543 309 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 ERVFRD-1P60508 538 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 VMO1Q7Z5L0 202 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 LAX1Q8IWV1 398 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 C11orf42Q8N5U0 333 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 TEX29Q8N6K0 151 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 RFESDQ8TAC1 157 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 DIRAS2Q96HU8 199 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 TBX15Q96SF7 602 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 MIXL1Q9H2W2 232 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 AUNIPQ9H7T9 357 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 SIRT7Q9NRC8 400 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 MBNL3Q9NUK0 354 aaKnown RBP16.42■□□□□ 0.22
CTSD-206ENST00000497544 TMEM160Q9NX00 188 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 CALYQ9NYX4 217 aa16.42■□□□□ 0.22
CTSD-206ENST00000497544 ELF5Q9UKW6 265 aaPredicted RBP16.42■□□□□ 0.22
CTSD-206ENST00000497544 RBP4P02753 201 aa16.41■□□□□ 0.22
CTSD-206ENST00000497544 S100A5P33763 92 aa16.41■□□□□ 0.22
CTSD-206ENST00000497544 C17orf58Q2M2W7 97 aa16.41■□□□□ 0.22
CTSD-206ENST00000497544 FAM120AOSQ5T036 256 aa16.41■□□□□ 0.22
CTSD-206ENST00000497544 MOB1BQ7L9L4 216 aa16.41■□□□□ 0.22
CTSD-206ENST00000497544 NANPQ8TBE9 248 aa16.41■□□□□ 0.22
CTSD-206ENST00000497544 UPRTQ96BW1 309 aa16.41■□□□□ 0.22
CTSD-206ENST00000497544 HEXA-AS1Q9H8Q6 139 aa16.41■□□□□ 0.22
CTSD-206ENST00000497544 TAF9BQ9HBM6 251 aa16.41■□□□□ 0.22
CTSD-206ENST00000497544 Q9N2K0 584 aa16.41■□□□□ 0.22
CTSD-206ENST00000497544 MGAT4AQ9UM21 535 aa16.41■□□□□ 0.22
CTSD-206ENST00000497544 SPINT2O43291 252 aa16.4■□□□□ 0.22
CTSD-206ENST00000497544 CLPXO76031 633 aa16.4■□□□□ 0.22
CTSD-206ENST00000497544 MELTFP08582 738 aa16.4■□□□□ 0.22
CTSD-206ENST00000497544 IGHV1-8P0DP01 117 aa16.4■□□□□ 0.22
CTSD-206ENST00000497544 OMGP23515 440 aa16.4■□□□□ 0.22
CTSD-206ENST00000497544 MADCAM1Q13477 382 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms