RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 FAM110DQ8TAY7 271 aaPredicted RBP12.58□□□□□ -0.4
HDAC4-213ENST00000496347 NEK7Q8TDX7 302 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 MYDGFQ969H8 173 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 RBM14Q96PK6 669 aaKnown RBP12.58□□□□□ -0.4
HDAC4-213ENST00000496347 RAB9BQ9NP90 201 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 A0A1W2PP11 408 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 A0A1W2PPI3 338 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 AIPO00170 330 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 MAS1P04201 325 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 FAM106CPP0CH98 169 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 RAB7AP51149 207 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 AQP4P55087 323 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 TMEM95Q3KNT9 176 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 PDLIM3Q53GG5 364 aaPredicted RBP12.57□□□□□ -0.4
HDAC4-213ENST00000496347 UTF1Q5T230 341 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 NDUFA11Q86Y39 141 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 LYPD6Q86Y78 171 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 OR8H3Q8N146 312 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 MS4A15Q8N5U1 240 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 C8orf31Q8N9H6 132 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 OR52M1Q8NGK5 317 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 OR10X1Q8NGY0 326 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 SCN3BQ9NY72 215 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 GHRLQ9UBU3 117 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 PSG11Q9UQ72 335 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 MOB4Q9Y3A3 225 aa12.57□□□□□ -0.4
HDAC4-213ENST00000496347 A0A1W2PPK0 400 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 C15orf65H3BRN8 121 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 PIN1P1O15428 100 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 ORC5O43913 435 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 CA11O75493 328 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 MGMTP16455 207 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 CD24P25063 80 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 GNG10P50151 68 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 GPR50Q13585 617 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 Q3ZCU0 254 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 C6orf141Q5SZD1 244 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 THNSL2Q86YJ6 484 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 OR56B4Q8NH76 319 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 RFESDQ8TAC1 157 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 PHYHIPQ92561 330 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 LEAP2Q969E1 77 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 CST11Q9H112 138 aa12.56□□□□□ -0.4
HDAC4-213ENST00000496347 NKX1-2Q9UD57 310 aaPredicted RBP12.56□□□□□ -0.4
HDAC4-213ENST00000496347 LSM2Q9Y333 95 aaKnown RBP12.56□□□□□ -0.4
HDAC4-213ENST00000496347 FAM90A9PA6NNJ1 464 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 MCRIP1C9JLW8 97 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 HSD17B6O14756 317 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 GLAP06280 429 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 UBBP0CG47 229 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 CD28P10747 220 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 SLC35A2P78381 396 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 GABPB1Q06547 395 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-213ENST00000496347 SPHARQ15513 63 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 LTC4SQ16873 150 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 C6orf183Q5T699 404 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 RAB12Q6IQ22 244 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 TRAT1Q6PIZ9 186 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 Q6ZS46 218 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 GAPTQ8N292 157 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 OR4F17Q8NGA8 305 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 Q96M66 194 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 OR4F4Q96R69 305 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 OCSTAMPQ9BR26 566 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 ANKRD60Q9BZ19 345 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 VCX3BQ9H321 246 aa12.55□□□□□ -0.4
HDAC4-213ENST00000496347 TRAV39A0A0B4J263 110 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 SDCBPO00560 298 aaPredicted RBP12.54□□□□□ -0.4
HDAC4-213ENST00000496347 CRTAPO75718 401 aaPredicted RBP12.54□□□□□ -0.4
HDAC4-213ENST00000496347 SC5DO75845 299 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 IGHV3-7P01780 117 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 MT-ND4P03905 459 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 AMY1AP04745 511 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 AMY2AP04746 511 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 EMX1Q04741 257 aaPredicted RBP12.54□□□□□ -0.4
HDAC4-213ENST00000496347 ZNF816Q0VGE8 651 aaPredicted RBP12.54□□□□□ -0.4
HDAC4-213ENST00000496347 ABCA11PQ4W5N1 156 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 FBLN7Q53RD9 439 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 LINC00311Q8N616 119 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 DRAM1Q8N682 238 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 TMEM104Q8NE00 496 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 NRG4Q8WWG1 115 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 ARL11Q969Q4 196 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 OR5M11Q96RB7 305 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 SELENOIQ9C0D9 397 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 GFOD1Q9NXC2 390 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 ETAA1Q9NY74 926 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 TPRKBQ9Y3C4 175 aa12.54□□□□□ -0.4
HDAC4-213ENST00000496347 PTGES3LE9PB15 166 aa12.53□□□□□ -0.4
HDAC4-213ENST00000496347 SPINT2O43291 252 aa12.53□□□□□ -0.4
HDAC4-213ENST00000496347 SNRNP70P08621 437 aaKnown RBP12.53□□□□□ -0.4
HDAC4-213ENST00000496347 FUT3P21217 361 aa12.53□□□□□ -0.4
HDAC4-213ENST00000496347 MYF6P23409 242 aa12.53□□□□□ -0.4
HDAC4-213ENST00000496347 IL3RAP26951 378 aa12.53□□□□□ -0.4
HDAC4-213ENST00000496347 LOXL3P58215 753 aa12.53□□□□□ -0.4
HDAC4-213ENST00000496347 IRF3Q14653 427 aa12.53□□□□□ -0.4
HDAC4-213ENST00000496347 MED22Q15528 200 aa12.53□□□□□ -0.4
HDAC4-213ENST00000496347 ACSM3Q53FZ2 586 aa12.53□□□□□ -0.4
HDAC4-213ENST00000496347 ZNF554Q86TJ5 538 aa12.53□□□□□ -0.4
HDAC4-213ENST00000496347 IZUMO1Q8IYV9 350 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms