RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 ST6GALNAC5Q9BVH7 336 aa12.96□□□□□ -0.33
HPS4-216ENST00000493455 GAL3ST2Q9H3Q3 398 aa12.96□□□□□ -0.33
HPS4-216ENST00000493455 CALYQ9NYX4 217 aa12.96□□□□□ -0.33
HPS4-216ENST00000493455 UBE2J1Q9Y385 318 aaPredicted RBP12.96□□□□□ -0.33
HPS4-216ENST00000493455 AUP1Q9Y679 476 aa12.96□□□□□ -0.33
HPS4-216ENST00000493455 IGHV3OR16-10A0A075B7F0 116 aa12.95□□□□□ -0.34
HPS4-216ENST00000493455 ZNF729A6NN14 1252 aaPredicted RBP12.95□□□□□ -0.34
HPS4-216ENST00000493455 FCGR3AP08637 254 aa12.95□□□□□ -0.34
HPS4-216ENST00000493455 NFYBP25208 207 aa12.95□□□□□ -0.34
HPS4-216ENST00000493455 PNLIPRP3Q17RR3 467 aa12.95□□□□□ -0.34
HPS4-216ENST00000493455 C6orf183Q5T699 404 aa12.95□□□□□ -0.34
HPS4-216ENST00000493455 IL17RELQ6ZVW7 336 aa12.95□□□□□ -0.34
HPS4-216ENST00000493455 VMO1Q7Z5L0 202 aa12.95□□□□□ -0.34
HPS4-216ENST00000493455 OR6Q1Q8NGQ2 317 aa12.95□□□□□ -0.34
HPS4-216ENST00000493455 DACT3Q96B18 629 aaPredicted RBP12.95□□□□□ -0.34
HPS4-216ENST00000493455 RIMS4Q9H426 269 aaPredicted RBP12.95□□□□□ -0.34
HPS4-216ENST00000493455 IFT46Q9NQC8 304 aa12.95□□□□□ -0.34
HPS4-216ENST00000493455 A3GALT2U3KPV4 340 aa12.95□□□□□ -0.34
HPS4-216ENST00000493455 IGHV3-43A0A0B4J1X8 118 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 A0A1W2PRD5 423 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 A0A1W2PRF3 423 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 A0A1W2PRM7 423 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 MEIOCA2RUB1 952 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 FABP12A6NFH5 140 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 C12orf77C9JDV5 145 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 SSX5O60225 188 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 NAPSAO96009 420 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 IGHV3-43DP0DP04 118 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 COX7A1P24310 79 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 PRSS3P35030 304 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 KLRD1Q13241 179 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 CR1LQ2VPA4 569 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 C11orf91Q3C1V1 193 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 Q6ZPA2 131 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 OR1L1Q8NH94 360 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 WDFY2Q96P53 400 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 SUCNR1Q9BXA5 334 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 TMPRSS13Q9BYE2 586 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 TAF9BQ9HBM6 251 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.94□□□□□ -0.34
HPS4-216ENST00000493455 PTTG2Q9NZH5 202 aa12.94□□□□□ -0.34
HPS4-216ENST00000493455 KBTBD11-OT1A0A1B0GTJ5 212 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 hCG_1809904A0A1W2PP81 198 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 A0A1W2PPE2 198 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 A0A1W2PR64 198 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 A0A1W2PRV1 198 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 A8MV72 311 aaPredicted RBP12.93□□□□□ -0.34
HPS4-216ENST00000493455 SPINT2O43291 252 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 MMP23AO75900 390 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 IGHV3-7P01780 117 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 HLA-DQB1P01920 261 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 FOSL1P15407 271 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 GATA3P23771 443 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 GDNFP39905 211 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 DLX6P56179 175 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 HLA-DRB3P79483 266 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 PITPNAQ00169 270 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 PAX5Q02548 391 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 PAX8Q06710 450 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 C17orf58Q2M2W7 97 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 BAIAP2L2Q6UXY1 529 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 MOB1BQ7L9L4 216 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 KIR3DL3Q8N743 410 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 GVQW1Q8N7I0 195 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 Q8N7P7 452 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 IL1F10Q8WWZ1 152 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 CORO2AQ92828 525 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 LHX4Q969G2 390 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 SIRPDQ9H106 197 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 NCOR1P1Q9H4R4 102 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 Q9N2K0 584 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 TAS2R3Q9NYW6 316 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 IDI2-AS1Q9NZ38 188 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 KPTNQ9Y664 436 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 CELSR1Q9NYQ6 3014 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 ZANQ9Y493 2812 aa12.93□□□□□ -0.34
HPS4-216ENST00000493455 TRAV40A0A0B4J280 105 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 M0R1W7 72 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 SDCBPO00560 298 aaPredicted RBP12.92□□□□□ -0.34
HPS4-216ENST00000493455 AVPP01185 164 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 HBZP02008 142 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 IGHV1-8P0DP01 117 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 GZMHP20718 246 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 PYDC2Q56P42 97 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 SPANXN2Q5MJ10 180 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 TRAT1Q6PIZ9 186 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 GAPTQ8N292 157 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 OR10V1Q8NGI7 309 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 LEAP2Q969E1 77 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 KIRREL1Q96J84 757 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 TBX15Q96SF7 602 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 ZNF286AQ9HBT8 521 aa12.92□□□□□ -0.34
HPS4-216ENST00000493455 CSPG4Q6UVK1 2322 aa12.91□□□□□ -0.34
HPS4-216ENST00000493455 IGKV1D-8A0A087WSZ0 117 aa12.91□□□□□ -0.34
HPS4-216ENST00000493455 C17orf98A8MV24 154 aa12.91□□□□□ -0.34
HPS4-216ENST00000493455 J3QLI3 93 aa12.91□□□□□ -0.34
HPS4-216ENST00000493455 ORC5O43913 435 aa12.91□□□□□ -0.34
HPS4-216ENST00000493455 MELTFP08582 738 aa12.91□□□□□ -0.34
HPS4-216ENST00000493455 SCTP09683 121 aa12.91□□□□□ -0.34
HPS4-216ENST00000493455 GNG10P50151 68 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms