RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 ARL6Q9H0F7 186 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 NGBQ9NPG2 151 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 RDH8Q9NYR8 311 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 ZDHHC8Q9ULC8 765 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 PIEZO2Q9H5I5 2752 aa11.81□□□□□ -0.52
PTPN7-216ENST00000492977 BSNQ9UPA5 3926 aa11.81□□□□□ -0.52
PTPN7-216ENST00000492977 SPRY3O43610 288 aa11.81□□□□□ -0.52
PTPN7-216ENST00000492977 HOXB5P09067 269 aa11.81□□□□□ -0.52
PTPN7-216ENST00000492977 CEBPDP49716 269 aaPredicted RBP11.81□□□□□ -0.52
PTPN7-216ENST00000492977 IL15RAQ13261 267 aa11.81□□□□□ -0.52
PTPN7-216ENST00000492977 HMGN3Q15651 99 aa11.81□□□□□ -0.52
PTPN7-216ENST00000492977 OR11L1Q8NGX0 322 aa11.81□□□□□ -0.52
PTPN7-216ENST00000492977 SECTM1Q8WVN6 248 aa11.81□□□□□ -0.52
PTPN7-216ENST00000492977 OR10C1Q96KK4 312 aa11.81□□□□□ -0.52
PTPN7-216ENST00000492977 KCNIP1Q9NZI2 227 aa11.81□□□□□ -0.52
PTPN7-216ENST00000492977 OR2W1Q9Y3N9 320 aa11.81□□□□□ -0.52
PTPN7-216ENST00000492977 CHD3Q12873 2000 aaKnown RBP11.8□□□□□ -0.52
PTPN7-216ENST00000492977 MPTX1A8MV57 137 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 ABCD4O14678 606 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 RP2O75695 350 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 TNFSF4P23510 183 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 HTR2BP41595 481 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 ASCL1P50553 236 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 SRPXP78539 464 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 PAX5Q02548 391 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 BSPH1Q075Z2 132 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 ACOT7LQ6ZUV0 252 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 CMTM1Q8IZ96 169 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 LGI3Q8N145 548 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 KCNRGQ8N5I3 272 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 LILRB4Q8NHJ6 448 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 GLYATL2Q8WU03 294 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 ZCCHC14Q8WYQ9 949 aaKnown RBP11.8□□□□□ -0.52
PTPN7-216ENST00000492977 IL19Q9UHD0 177 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 FBXO9Q9UK97 447 aaPredicted RBP11.8□□□□□ -0.52
PTPN7-216ENST00000492977 MAB21L2Q9Y586 359 aa11.8□□□□□ -0.52
PTPN7-216ENST00000492977 IGKV1D-13A0A0B4J2D9 117 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 C3orf85A0A1B0GTC6 90 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 VSTM5A8MXK1 200 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 LHBP01229 141 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 PET100P0DJ07 73 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 IGKV1-13P0DP09 117 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 LYL1P12980 280 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 S100GP29377 79 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 PRDX2P32119 198 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 COL10A1Q03692 680 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 SP6Q3SY56 376 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 GGNBP1Q5YKI7 109 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 UNQ6494/PRO21346Q6UXR6 183 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 ZNF818PQ6ZRF7 136 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 INO80EQ8NBZ0 244 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-216ENST00000492977 ITLN1Q8WWA0 313 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 IL1F10Q8WWZ1 152 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 ERGIC1Q969X5 290 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 MSI2Q96DH6 328 aaKnown RBP11.79□□□□□ -0.52
PTPN7-216ENST00000492977 C18orf12Q96KH6 178 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 WFIKKN1Q96NZ8 548 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 RNF126Q9BV68 326 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 PRORYQ9H606 182 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 TAF9BQ9HBM6 251 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 MBD2Q9UBB5 411 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 UBQLN2Q9UHD9 624 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 SPTBN4Q9H254 2564 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 OOEPA6NGQ2 149 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-216ENST00000492977 PHF1O43189 567 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-216ENST00000492977 IGHV1-46P01743 117 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 HEXAP06865 529 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 PSG2P11465 335 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 OR3A1P47881 315 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 TNFAIP6P98066 277 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-216ENST00000492977 EXOSC2Q13868 293 aaKnown RBP11.79□□□□□ -0.52
PTPN7-216ENST00000492977 IAH1Q2TAA2 248 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-216ENST00000492977 FBXL19-AS1Q494R0 122 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 PRSS54Q6PEW0 395 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 TBC1D26Q86UD7 250 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 SLC51BQ86UW2 128 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 MOGAT3Q86VF5 341 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 GCSAMQ8N6F7 178 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 BVESQ8NE79 360 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 DIRC2Q96SL1 478 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 TMEM222Q9H0R3 208 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 CCL28Q9NRJ3 127 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 DNAJB11Q9UBS4 358 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 KIF25Q9UIL4 384 aa11.79□□□□□ -0.52
PTPN7-216ENST00000492977 ERRFI1Q9UJM3 462 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-216ENST00000492977 ATMQ13315 3056 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 TLN1Q9Y490 2541 aaKnown RBP11.78□□□□□ -0.52
PTPN7-216ENST00000492977 TRAV39A0A0B4J263 110 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 RNF222A6NCQ9 220 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 B3GALNT1O75752 331 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 CFDP00746 253 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-216ENST00000492977 ADH4P08319 380 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 EGR1P18146 543 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 S100A1P23297 94 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 CHRNB4P30926 498 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 AP2S1P53680 142 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-216ENST00000492977 AESQ08117 197 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 ADIPOQQ15848 244 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 C6orf183Q5T699 404 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms