RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 FAHD2BQ6P2I3 314 aaPredicted RBP8.03□□□□□ -1.12
USP54-214ENST00000492357 C11orf88Q6PI97 169 aa8.03□□□□□ -1.12
USP54-214ENST00000492357 ZNF782Q6ZMW2 699 aaPredicted RBP8.03□□□□□ -1.12
USP54-214ENST00000492357 Q6ZNX1 250 aa8.03□□□□□ -1.12
USP54-214ENST00000492357 NRARPQ7Z6K4 114 aa8.03□□□□□ -1.12
USP54-214ENST00000492357 CENPSQ8N2Z9 138 aa8.03□□□□□ -1.12
USP54-214ENST00000492357 TMEM185AQ8NFB2 350 aa8.03□□□□□ -1.12
USP54-214ENST00000492357 OR8B3Q8NGG8 313 aa8.03□□□□□ -1.12
USP54-214ENST00000492357 GALMQ96C23 342 aa8.03□□□□□ -1.12
USP54-214ENST00000492357 FAHD2AQ96GK7 314 aa8.03□□□□□ -1.12
USP54-214ENST00000492357 OR8B2Q96RD0 313 aa8.03□□□□□ -1.12
USP54-214ENST00000492357 KIF25Q9UIL4 384 aa8.03□□□□□ -1.12
USP54-214ENST00000492357 JPT1Q9UK76 154 aa8.03□□□□□ -1.12
USP54-214ENST00000492357 RALYQ9UKM9 306 aaKnown RBP8.03□□□□□ -1.12
USP54-214ENST00000492357 IGHV3OR15-7A0A075B7D8 119 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 A8MXK9 166 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 PYCARD-AS1I3L0S3 204 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 F2RL2O00254 374 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 PPIHO43447 177 aaKnown RBP8.02□□□□□ -1.13
USP54-214ENST00000492357 B3GALNT1O75752 331 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 TUSC2O75896 110 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 RGS11O94810 467 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 IGHV4-39P01824 125 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 GYPAP02724 150 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 HEXAP06865 529 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 WNT2P09544 360 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 CGB3P0DN86 165 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 CGB7P0DN87 165 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 RPS2P15880 293 aaKnown RBP8.02□□□□□ -1.13
USP54-214ENST00000492357 SLC25A16P16260 332 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 ZBTB25P24278 435 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 DNASE1P24855 282 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 FPR2P25090 351 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 CEBPDP49716 269 aaPredicted RBP8.02□□□□□ -1.13
USP54-214ENST00000492357 TAS2R31P59538 309 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 GMFBP60983 142 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 AESQ08117 197 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 PDCD1Q15116 288 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 RNASE12Q5GAN4 147 aaKnown RBP8.02□□□□□ -1.13
USP54-214ENST00000492357 ZNF660Q6AZW8 331 aaPredicted RBP8.02□□□□□ -1.13
USP54-214ENST00000492357 OR52W1Q6IF63 320 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 CLEC2AQ6UVW9 174 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 PRSS57Q6UWY2 283 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 CCBE1Q6UXH8 406 aaPredicted RBP8.02□□□□□ -1.13
USP54-214ENST00000492357 IDO2Q6ZQW0 420 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 FAM185AQ8N0U4 392 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 BATF2Q8N1L9 274 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 C8orf31Q8N9H6 132 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 ZNRF1Q8ND25 227 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 DEFB108BQ8NET1 73 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 OR5T2Q8NGG2 359 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 OR51S1Q8NGJ8 323 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 OR10J5Q8NHC4 309 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 ZFAND1Q8TCF1 268 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 CCDC107Q8WV48 283 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 EDARADDQ8WWZ3 215 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 DYRK2Q92630 601 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 KIRREL1Q96J84 757 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 CCL13Q99616 98 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 HDHD3Q9BSH5 251 aaPredicted RBP8.02□□□□□ -1.13
USP54-214ENST00000492357 PIMREGQ9BSJ6 248 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 TAF9BQ9HBM6 251 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 MCUBQ9NWR8 336 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 EHFQ9NZC4 300 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 ZNF581Q9P0T4 197 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 CLN8Q9UBY8 286 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 POLR3KQ9Y2Y1 108 aaPredicted RBP8.02□□□□□ -1.13
USP54-214ENST00000492357 HELZ2Q9BYK8 2649 aaKnown RBP8.02□□□□□ -1.13
USP54-214ENST00000492357 HRNRQ86YZ3 2850 aaPredicted RBP8.02□□□□□ -1.13
USP54-214ENST00000492357 RELNP78509 3460 aa8.02□□□□□ -1.13
USP54-214ENST00000492357 KBTBD11-OT1A0A1B0GTJ5 212 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 hCG_1809904A0A1W2PP81 198 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 A0A1W2PPE2 198 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 A0A1W2PR64 198 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 A0A1W2PRV1 198 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 MEIS3P1A6NDR6 274 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 VWC2LB2RUY7 222 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 HSPB6O14558 160 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 DVL1O14640 695 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 PEX14O75381 377 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 IL5P05113 134 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 LIPFP07098 398 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 IL2RGP31785 369 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 GLIPR1P48060 266 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 ATP5J2P56134 94 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 FAM201AQ5SY85 155 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 ZNF841Q6ZN19 808 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 C1orf122Q6ZSJ8 110 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 TGIF2LYQ8IUE0 185 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 FAM216BQ8N7L0 139 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 ZBTB34Q8NCN2 500 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 FAM168AQ92567 244 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 MOB3AQ96BX8 217 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 SLC6A7Q99884 636 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 DCTN5Q9BTE1 182 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 TINAGL1Q9GZM7 467 aaPredicted RBP8.01□□□□□ -1.13
USP54-214ENST00000492357 DCAF16Q9NXF7 216 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 ZNF230Q9UIE0 474 aaPredicted RBP8.01□□□□□ -1.13
USP54-214ENST00000492357 DSCAML1Q8TD84 2053 aa8.01□□□□□ -1.13
USP54-214ENST00000492357 IGKV1D-8A0A087WSZ0 117 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms