RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 GGNBP1Q5YKI7 109 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 RPL7L1Q6DKI1 246 aaKnown RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 RHBDD2Q6NTF9 364 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 PLXDC2Q6UX71 529 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 RBMS3Q6XE24 437 aaKnown RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 Q6ZS49 121 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 GALNTL5Q7Z4T8 443 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CENPVQ7Z7K6 275 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 LINC00346Q8IVM7 164 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 OR5AS1Q8N127 324 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC22A18ASQ8N1D0 253 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM24BQ8N5W8 94 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF283Q8N7M2 679 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF321PQ8N8H1 164 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF441Q8N8Z8 693 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF565Q8N9K5 539 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CCDC71LQ8N9Z2 235 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 GATSQ8NAP1 163 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC38A9Q8NBW4 561 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ACBD4Q8NC06 268 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CLEC18CQ8NCF0 446 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 NFAM1Q8NET5 270 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 Q8NFD4 153 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 OR8G5Q8NG78 346 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 OR51A2Q8NGJ7 313 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 OR10G4Q8NGN3 311 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 OR4A4PQ8NGN8 299 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 OR13G1Q8NGZ3 307 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FNDC9Q8TBE3 224 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 NANPQ8TBE9 248 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 OR51E1Q8TCB6 317 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 LMX1AQ8TE12 382 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 RNF138Q8WVD3 245 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 MBD3L1Q8WWY6 194 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 PATE1Q8WXA2 126 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 GTF3AQ92664 365 aaKnown RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM54Q969K7 222 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SPTSSAQ969W0 71 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM230Q96A57 120 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SPSB1Q96BD6 273 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF524Q96C55 264 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 MRPL38Q96DV4 380 aaKnown RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 RBMXL1Q96E39 390 aaKnown RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 GNPNAT1Q96EK6 184 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 TVP23CQ96ET8 276 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ADAT3Q96EY9 351 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 C14orf79Q96F83 325 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 PGAM5Q96HS1 289 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ARHGAP5-AS1Q96IT6 56 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 AKR1E2Q96JD6 320 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 C18orf12Q96KH6 178 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 C1orf147Q96MC9 270 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM56Q96MV1 263 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 TECTBQ96PL2 329 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF385AQ96PM9 386 aaKnown RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 P2RX4Q99571 388 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SSX3Q99909 188 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CMSS1Q9BQ75 279 aaKnown RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF251Q9BRH9 671 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FAAP24Q9BTP7 215 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 EMC6Q9BV81 110 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 GGACTQ9BVM4 153 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM59Q9BXS4 323 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 RTN4RQ9BZR6 473 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC7A5P2Q9GIP4 190 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 OR11A1Q9GZK7 315 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 BANF2Q9H503 90 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SPACA1Q9HBV2 294 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 GPR84Q9NQS5 396 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 UFSP2Q9NUQ7 469 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ASF1BQ9NVP2 202 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 NECAP2Q9NVZ3 263 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CISD1Q9NZ45 108 aaKnown RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 EHFQ9NZC4 300 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 OR5AC2Q9NZP5 309 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF319Q9P2F9 582 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ANXA10Q9UJ72 324 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 DKKL1Q9UK85 242 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 KLK13Q9UKR3 277 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 RNF150Q9ULK6 438 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC7A11Q9UPY5 501 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 AMDHD2Q9Y303 409 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM96BQ9Y3D0 163 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM56-RWDD3S4R434 201 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 V9GYS6 101 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 COL5A1P20908 1838 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 EXPH5Q8NEV8 1989 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 PI4KAP42356 2102 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CHD3Q12873 2000 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 KIAA1549Q9HCM3 1950 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 IGHV1OR21-1A0A087WYE8 117 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A0A6YYD4 124 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 IGKV1-9A0A0C4DH69 117 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 C3orf85A0A1B0GTC6 90 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A1B0GU03 582 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 LOC107986453A0A1B0GWG9 222 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A1B0GX78 115 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM230AA0A1W2PPH8 454 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A1W2PR77 199 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 LRP5LA4QPB2 252 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms