RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 TRAV1-1A0A0B4J248 108 aa19.25■□□□□ 0.67
CLN5-202ENST00000485938 HSPB6O14558 160 aa19.25■□□□□ 0.67
CLN5-202ENST00000485938 PGLYRP1O75594 196 aaPredicted RBP19.25■□□□□ 0.67
CLN5-202ENST00000485938 RPS18P62269 152 aaKnown RBP19.25■□□□□ 0.67
CLN5-202ENST00000485938 HLA-BQ31612 363 aa19.25■□□□□ 0.67
CLN5-202ENST00000485938 PYY3Q5JQD4 70 aa19.25■□□□□ 0.67
CLN5-202ENST00000485938 WIPI1Q5MNZ9 446 aaPredicted RBP19.25■□□□□ 0.67
CLN5-202ENST00000485938 HLA-CQ95604 372 aa19.25■□□□□ 0.67
CLN5-202ENST00000485938 LOC102723971A0A1B0GUV8 181 aa19.25■□□□□ 0.67
CLN5-202ENST00000485938 ATXN7O15265 892 aaPredicted RBP19.25■□□□□ 0.67
CLN5-202ENST00000485938 TNFSF12O43508 249 aa19.25■□□□□ 0.67
CLN5-202ENST00000485938 IGHV3-9P01782 118 aa19.25■□□□□ 0.67
CLN5-202ENST00000485938 CTXN2P0C2S0 81 aa19.25■□□□□ 0.67
CLN5-202ENST00000485938 RNPS1Q15287 305 aaKnown RBP19.25■□□□□ 0.67
CLN5-202ENST00000485938 ZNF295-AS1Q8N0V1 137 aa19.25■□□□□ 0.67
CLN5-202ENST00000485938 OR10G4Q8NGN3 311 aa19.25■□□□□ 0.67
CLN5-202ENST00000485938 MTCH1Q9NZJ7 389 aa19.25■□□□□ 0.67
CLN5-202ENST00000485938 A0A0G2JRQ6 117 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 MPV17LQ2QL34 196 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 P4HA3Q7Z4N8 544 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 CYTIPO60759 359 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 HIST1H2BKO60814 126 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 DFFBO76075 338 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 HIST1H2BJP06899 126 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 HIST1H2BOP23527 126 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 HIST1H2BBP33778 126 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 HIST1H2BDP58876 126 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 HIST1H2BCP62807 126 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 HIST2H2BEQ16778 126 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.24■□□□□ 0.67
CLN5-202ENST00000485938 STX12Q86Y82 276 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 NEK7Q8TDX7 302 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 HIST1H2BHQ93079 126 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 ZNF845Q96IR2 970 aaPredicted RBP19.24■□□□□ 0.67
CLN5-202ENST00000485938 HIST1H2BNQ99877 126 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 HIST1H2BMQ99879 126 aa19.24■□□□□ 0.67
CLN5-202ENST00000485938 GAR1Q9NY12 217 aaKnown RBP19.24■□□□□ 0.67
CLN5-202ENST00000485938 TNRC6BQ9UPQ9 1833 aaKnown RBP19.24■□□□□ 0.67
CLN5-202ENST00000485938 TRAPPC6AO75865 159 aa19.23■□□□□ 0.67
CLN5-202ENST00000485938 F2RP25116 425 aa19.23■□□□□ 0.67
CLN5-202ENST00000485938 HLA-DRB3P79483 266 aa19.23■□□□□ 0.67
CLN5-202ENST00000485938 CEACAM21Q3KPI0 293 aa19.23■□□□□ 0.67
CLN5-202ENST00000485938 OR2B11Q5JQS5 317 aa19.23■□□□□ 0.67
CLN5-202ENST00000485938 PCSK4Q6UW60 755 aa19.23■□□□□ 0.67
CLN5-202ENST00000485938 THNSL2Q86YJ6 484 aa19.23■□□□□ 0.67
CLN5-202ENST00000485938 CLDN23Q96B33 292 aa19.23■□□□□ 0.67
CLN5-202ENST00000485938 ZNHIT1O43257 154 aa19.23■□□□□ 0.67
CLN5-202ENST00000485938 S100A2P29034 98 aa19.23■□□□□ 0.67
CLN5-202ENST00000485938 NRN1LQ496H8 165 aa19.23■□□□□ 0.67
CLN5-202ENST00000485938 SPNS3Q6ZMD2 512 aa19.23■□□□□ 0.67
CLN5-202ENST00000485938 KIAA1324LA8MWY0 1029 aaPredicted RBP19.22■□□□□ 0.67
CLN5-202ENST00000485938 H3BP45 60 aa19.22■□□□□ 0.67
CLN5-202ENST00000485938 FOLR3P41439 243 aa19.22■□□□□ 0.67
CLN5-202ENST00000485938 ZDHHC23Q8IYP9 409 aa19.22■□□□□ 0.67
CLN5-202ENST00000485938 GPR146Q96CH1 333 aa19.22■□□□□ 0.67
CLN5-202ENST00000485938 CYB5BO43169 146 aa19.22■□□□□ 0.67
CLN5-202ENST00000485938 TMEM45BQ96B21 275 aa19.22■□□□□ 0.67
CLN5-202ENST00000485938 GNG13Q9P2W3 67 aa19.22■□□□□ 0.67
CLN5-202ENST00000485938 COLQQ9Y215 455 aaPredicted RBP19.22■□□□□ 0.67
CLN5-202ENST00000485938 A0A1B0GU03 582 aa19.21■□□□□ 0.67
CLN5-202ENST00000485938 B4DEV8 164 aa19.21■□□□□ 0.67
CLN5-202ENST00000485938 TRAPPC2LH3BP13 241 aa19.21■□□□□ 0.67
CLN5-202ENST00000485938 IFNA5P01569 189 aa19.21■□□□□ 0.67
CLN5-202ENST00000485938 SLC25A6P12236 298 aa19.21■□□□□ 0.67
CLN5-202ENST00000485938 CCNOP22674 350 aa19.21■□□□□ 0.67
CLN5-202ENST00000485938 TMEM267Q0VDI3 215 aaPredicted RBP19.21■□□□□ 0.67
CLN5-202ENST00000485938 FAM90A2PQ658T7 463 aa19.21■□□□□ 0.67
CLN5-202ENST00000485938 C20orf204Q6ZNR8 217 aa19.21■□□□□ 0.67
CLN5-202ENST00000485938 MRPL30Q8TCC3 161 aaKnown RBP19.21■□□□□ 0.67
CLN5-202ENST00000485938 ZNF729A6NN14 1252 aaPredicted RBP19.2■□□□□ 0.66
CLN5-202ENST00000485938 GATCO43716 136 aaKnown RBP19.2■□□□□ 0.66
CLN5-202ENST00000485938 ARF1P84077 181 aaKnown RBP19.2■□□□□ 0.66
CLN5-202ENST00000485938 Q0VFX4 171 aa19.2■□□□□ 0.66
CLN5-202ENST00000485938 ZNF324BQ6AW86 544 aaPredicted RBP19.2■□□□□ 0.66
CLN5-202ENST00000485938 H1FOOQ8IZA3 346 aaPredicted RBP19.2■□□□□ 0.66
CLN5-202ENST00000485938 OR13D1Q8NGV5 346 aa19.2■□□□□ 0.66
CLN5-202ENST00000485938 PRDM6Q9NQX0 595 aa19.2■□□□□ 0.66
CLN5-202ENST00000485938 DEPPQ9NTK1 212 aa19.2■□□□□ 0.66
CLN5-202ENST00000485938 TREM2Q9NZC2 230 aa19.2■□□□□ 0.66
CLN5-202ENST00000485938 TMEM265A0A087WTH1 108 aa19.2■□□□□ 0.66
CLN5-202ENST00000485938 SEC14L6B5MCN3 397 aa19.2■□□□□ 0.66
CLN5-202ENST00000485938 CCL2P13500 99 aa19.2■□□□□ 0.66
CLN5-202ENST00000485938 CD200P41217 278 aa19.2■□□□□ 0.66
CLN5-202ENST00000485938 MKXQ8IYA7 352 aa19.2■□□□□ 0.66
CLN5-202ENST00000485938 GTF3AQ92664 365 aaKnown RBP19.2■□□□□ 0.66
CLN5-202ENST00000485938 RAB40CQ96S21 281 aa19.2■□□□□ 0.66
CLN5-202ENST00000485938 SYNGR1O43759 233 aa19.19■□□□□ 0.66
CLN5-202ENST00000485938 TRGC2P03986 189 aa19.19■□□□□ 0.66
CLN5-202ENST00000485938 RD3LP0DJH9 198 aa19.19■□□□□ 0.66
CLN5-202ENST00000485938 CDPF1Q6NVV7 123 aa19.19■□□□□ 0.66
CLN5-202ENST00000485938 MRPL21Q7Z2W9 205 aaKnown RBP19.19■□□□□ 0.66
CLN5-202ENST00000485938 RIMS4Q9H426 269 aaPredicted RBP19.19■□□□□ 0.66
CLN5-202ENST00000485938 RPRMQ9NS64 109 aa19.19■□□□□ 0.66
CLN5-202ENST00000485938 OR2W1Q9Y3N9 320 aa19.19■□□□□ 0.66
CLN5-202ENST00000485938 TNRC6AQ8NDV7 1962 aaKnown RBP19.19■□□□□ 0.66
CLN5-202ENST00000485938 C5orf49A4QMS7 147 aa19.19■□□□□ 0.66
CLN5-202ENST00000485938 GFRA1P56159 465 aa19.19■□□□□ 0.66
CLN5-202ENST00000485938 RAB11AP62491 216 aa19.19■□□□□ 0.66
CLN5-202ENST00000485938 SLC25A24Q6NUK1 477 aa19.19■□□□□ 0.66
CLN5-202ENST00000485938 OR51H1Q8NH63 302 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms