RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ITPR1Q14643 2758 aa12.27□□□□□ -0.44
CHD3-211ENST00000481999 CHD3Q12873 2000 aaKnown RBP12.27□□□□□ -0.44
CHD3-211ENST00000481999 MBD3L4A6NDZ8 208 aaPredicted RBP12.27□□□□□ -0.45
CHD3-211ENST00000481999 MBD3L3A6NE82 208 aaPredicted RBP12.27□□□□□ -0.45
CHD3-211ENST00000481999 MBD3L5A6NJ08 208 aaPredicted RBP12.27□□□□□ -0.45
CHD3-211ENST00000481999 C1QTNF9BB2RNN3 333 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 RNASEK-C17orf49H0YIS7 233 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 TRAPPC2LH3BP13 241 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 H7C1Q1 480 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 FBXO24O75426 580 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 GRPP07492 148 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 C1QTNF9P0C862 333 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 PVALBP20472 110 aaPredicted RBP12.27□□□□□ -0.45
CHD3-211ENST00000481999 FUT3P21217 361 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 GLP1RP43220 463 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 UCP3P55916 312 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 FGF12P61328 243 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 HFEQ30201 348 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 SP6Q3SY56 376 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 LIAT1Q6ZQX7 453 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 ZNF826PQ6ZT77 177 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 IQCF2Q8IXL9 164 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 Q8NA96 180 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 OR5L1Q8NGL2 311 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 MBD3L2Q8NHZ7 208 aaPredicted RBP12.27□□□□□ -0.45
CHD3-211ENST00000481999 NEK7Q8TDX7 302 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 MOB3AQ96BX8 217 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 PRELID3BQ9Y3B1 194 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 COL6A6A6NMZ7 2263 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 MKRN2OSH3BPM6 223 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 MBPP02686 304 aaPredicted RBP12.27□□□□□ -0.45
CHD3-211ENST00000481999 BMP5P22003 454 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 CEBPDP49716 269 aaPredicted RBP12.27□□□□□ -0.45
CHD3-211ENST00000481999 ZNF154Q13106 437 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 MSMPQ1L6U9 139 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 TMEM211Q6ICI0 200 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 CBLN2Q8IUK8 224 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 UBALD1Q8TB05 177 aa12.27□□□□□ -0.45
CHD3-211ENST00000481999 IGHV1-18A0A0C4DH31 117 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 MEX3AA1L020 520 aaKnown RBP12.26□□□□□ -0.45
CHD3-211ENST00000481999 GNG3P63215 75 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 SWI5Q1ZZU3 235 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 INO80CQ6PI98 192 aaPredicted RBP12.26□□□□□ -0.45
CHD3-211ENST00000481999 FBXW12Q6X9E4 464 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 LGI3Q8N145 548 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 CCDC71LQ8N9Z2 235 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 GTF3AQ92664 365 aaKnown RBP12.26□□□□□ -0.45
CHD3-211ENST00000481999 S100PBPQ96BU1 408 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 C18orf12Q96KH6 178 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 SMIM3Q9BZL3 60 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 OR51I2Q9H344 312 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 MLNRO43193 412 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 NDUFA2O43678 99 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 CD5P06127 495 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 ZNF83P51522 516 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 PHLDA2Q53GA4 152 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 GPR157Q5UAW9 335 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 Q6ZRG5 221 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 LYZL2Q7Z4W2 148 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 SCCPDHQ8NBX0 429 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 OR11L1Q8NGX0 322 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 FAM212BQ9NTI7 297 aaPredicted RBP12.26□□□□□ -0.45
CHD3-211ENST00000481999 MLXQ9UH92 298 aa12.26□□□□□ -0.45
CHD3-211ENST00000481999 FBXO9Q9UK97 447 aaPredicted RBP12.26□□□□□ -0.45
CHD3-211ENST00000481999 POLEQ07864 2286 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 BORCS7-ASMTA0A0B4J1R7 106 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 F12P00748 615 aaPredicted RBP12.25□□□□□ -0.45
CHD3-211ENST00000481999 SCTP09683 121 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 SFTA3P0C7M3 94 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 CBR1P16152 277 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 NPBWR1P48145 328 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 HERV-K104P61576 105 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 OR10Z1Q8NGY1 313 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 ARV1Q9H2C2 271 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 DIDO1Q9BTC0 2240 aaKnown RBP12.25□□□□□ -0.45
CHD3-211ENST00000481999 WNT9BO14905 357 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 GPR137BO60478 399 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 FAM27E3Q08E93 113 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 FAM76BQ5HYJ3 339 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 UNQ6494/PRO21346Q6UXR6 183 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 Q6ZR03 302 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 BHLHA15Q7RTS1 189 aaPredicted RBP12.25□□□□□ -0.45
CHD3-211ENST00000481999 LRP11Q86VZ4 500 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 MKXQ8IYA7 352 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 Q8NFD4 153 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 GLYATL2Q8WU03 294 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 ERGIC1Q969X5 290 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 MSI2Q96DH6 328 aaKnown RBP12.25□□□□□ -0.45
CHD3-211ENST00000481999 RSRP1Q9BUV0 290 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 OBP2BQ9NPH6 170 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 UFSP2Q9NUQ7 469 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 PLA2G2EQ9NZK7 142 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 MPC1Q9Y5U8 109 aa12.25□□□□□ -0.45
CHD3-211ENST00000481999 TRAV24A0A0B4J272 114 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 DIRAS3O95661 229 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 HEXAP06865 529 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 DVL1P1P54792 670 aaPredicted RBP12.24□□□□□ -0.45
CHD3-211ENST00000481999 MRPL49Q13405 166 aaKnown RBP12.24□□□□□ -0.45
CHD3-211ENST00000481999 IL13RA2Q14627 380 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM180AQ6UWF9 173 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms