RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 KLHL12Q53G59 568 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 ELP2Q6IA86 826 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 SCGB1D4Q6XE38 83 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 ZNF101Q8IZC7 436 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 GPR32P1Q8NGA4 272 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 OR52N1Q8NH53 320 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 OR5K1Q8NHB7 308 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 ZNRF2Q8NHG8 242 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 TNFAIP8L1Q8WVP5 186 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 PPP1R36Q96LQ0 422 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 RTBDNQ9BSG5 229 aaPredicted RBP3.41□□□□□ -1.86
COPA-203ENST00000481040 ZNF430Q9H8G1 570 aaPredicted RBP3.41□□□□□ -1.86
COPA-203ENST00000481040 TMEM216Q9P0N5 145 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 ATRNO75882 1429 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 BAZ2AQ9UIF9 1905 aaKnown RBP3.4□□□□□ -1.86
COPA-203ENST00000481040 BTNL10A8MVZ5 291 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 K7EPK0 472 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 KCNK1O00180 336 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 ISLRO14498 428 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 SULT1B1O43704 296 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 CCNKO75909 580 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 GTF2F2P13984 249 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 CXCL2P19875 107 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 HSD11B1P28845 292 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 MPIP34949 423 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 PMELP40967 661 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 NUDT2P50583 147 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 ZNF83P51522 516 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 ERVS71-1P61550 626 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 CCL7P80098 99 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 BTN1A1Q13410 526 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 SP6Q3SY56 376 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 C2orf83Q53S99 150 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 ZNF678Q5SXM1 525 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 CLVS2Q5SYC1 327 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 HENMT1Q5T8I9 393 aaKnown RBP3.4□□□□□ -1.87
COPA-203ENST00000481040 SPOPLQ6IQ16 392 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 NANOGP8Q6NSW7 305 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 RASSF6Q6ZTQ3 369 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 OR8A1Q8NGG7 326 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 OR9A2Q8NGT5 310 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 C16orf78Q8WTQ4 265 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 L3HYPDHQ96EM0 354 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 XPNPEP1Q9NQW7 623 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 TMEM38BQ9NVV0 291 aa3.4□□□□□ -1.87
COPA-203ENST00000481040 TEX50A0A1B0GTY4 177 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 NSA2O95478 260 aaKnown RBP3.39□□□□□ -1.87
COPA-203ENST00000481040 HBZP02008 142 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 IL6P05231 212 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 ATP5G1P05496 136 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 MYL12AP19105 171 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 TGFBR1P36897 503 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 PPP1R2P41236 205 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 SLCO1A2P46721 670 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 DAD1P61803 113 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 C1orf195Q5TG92 126 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 PPP1R2P3Q6NXS1 205 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 DPPA2Q7Z7J5 298 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 TMEM161BQ8NDZ6 487 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 OR1P1Q8NH06 330 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 C2orf15Q8WU43 125 aaKnown RBP3.39□□□□□ -1.87
COPA-203ENST00000481040 EEF1AKMT1Q8WVE0 214 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 TMBIM1Q969X1 311 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 ZNF717Q9BY31 904 aaPredicted RBP3.39□□□□□ -1.87
COPA-203ENST00000481040 ZSCAN16Q9H4T2 348 aaPredicted RBP3.39□□□□□ -1.87
COPA-203ENST00000481040 SLC2A9Q9NRM0 540 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 RWDD2AQ9UIY3 292 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 POLR1DQ9Y2S0 133 aa3.39□□□□□ -1.87
COPA-203ENST00000481040 OR7C2O60412 319 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 LINC00869P0C866 280 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 CTSEP14091 401 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 CNTFRP26992 372 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 OMPP47874 163 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 INPP1P49441 399 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 TAF6P49848 677 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 IDH3GP51553 393 aaPredicted RBP3.38□□□□□ -1.87
COPA-203ENST00000481040 SLC35A2P78381 396 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 HPCAP84074 193 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 MESTQ5EB52 335 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 ZFP2Q6ZN57 461 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 NAA40Q86UY6 237 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 GID4Q8IVV7 300 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 Q8N7P7 452 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 SLC35G3Q8N808 338 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 OR9I1Q8NGQ6 314 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 PRAP1Q96NZ9 151 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 DOK1Q99704 481 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 RNF5Q99942 180 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 DKKL1Q9UK85 242 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 ZNF337Q9Y3M9 751 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 YTHDF2Q9Y5A9 579 aaKnown RBP3.38□□□□□ -1.87
COPA-203ENST00000481040 DOCK9Q9BZ29 2069 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 ADAMTS9Q9P2N4 1935 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 PLXNB3Q9ULL4 1909 aa3.38□□□□□ -1.87
COPA-203ENST00000481040 YLPM1P49750 1951 aaKnown RBP3.38□□□□□ -1.87
COPA-203ENST00000481040 ZFYVE9O95405 1425 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 COL2A1P02458 1487 aaPredicted RBP3.37□□□□□ -1.87
COPA-203ENST00000481040 IGHV1-45A0A0A0MS14 117 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 GMNCA6NCL1 334 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms