RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 OCM2P0CE71 109 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 OCMP0CE72 109 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-212ENST00000479586 UBCP0CG48 685 aaKnown RBP13.29□□□□□ -0.28
HMGN1-212ENST00000479586 ZNF20P17024 532 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 CNTFRP26992 372 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 AADACL4Q5VUY2 407 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 SAXO1Q8IYX7 474 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 LINC00311Q8N616 119 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 UBALD1Q8TB05 177 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 NR1H4Q96RI1 486 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-212ENST00000479586 MBOAT4Q96T53 435 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 RSRP1Q9BUV0 290 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 BARHL1Q9BZE3 327 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 STUB1Q9UNE7 303 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 MRPS28Q9Y2Q9 187 aaKnown RBP13.29□□□□□ -0.28
HMGN1-212ENST00000479586 A0A1W2PQL4 384 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-212ENST00000479586 SLC25A17O43808 307 aa13.28□□□□□ -0.28
HMGN1-212ENST00000479586 RAP2AP10114 183 aa13.28□□□□□ -0.28
HMGN1-212ENST00000479586 MMDQ15546 238 aa13.28□□□□□ -0.28
HMGN1-212ENST00000479586 DHFR2Q86XF0 187 aa13.28□□□□□ -0.28
HMGN1-212ENST00000479586 MINDY2Q8NBR6 621 aa13.28□□□□□ -0.28
HMGN1-212ENST00000479586 CNIH3Q8TBE1 160 aa13.28□□□□□ -0.28
HMGN1-212ENST00000479586 ELAC2Q9BQ52 826 aaKnown RBP13.28□□□□□ -0.28
HMGN1-212ENST00000479586 ARL8BQ9NVJ2 186 aa13.28□□□□□ -0.28
HMGN1-212ENST00000479586 IGHV7-81A0A0B4J1V7 117 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 IGHV3-43A0A0B4J1X8 118 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 SDCBPO00560 298 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-212ENST00000479586 SLC31A2O15432 143 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 SOX15O60248 233 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 APOL3O95236 402 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 IGHV3-43DP0DP04 118 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 IL3RAP26951 378 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 BLVRBP30043 206 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-212ENST00000479586 CRISP1P54107 249 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 MS4A2Q01362 244 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 PAX5Q02548 391 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 ANKRD13BQ86YJ7 626 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 OR13C9Q8NGT0 318 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 OR10AC1Q8NH08 325 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 UTP4Q969X6 686 aaKnown RBP13.27□□□□□ -0.29
HMGN1-212ENST00000479586 RNF166Q96A37 237 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-212ENST00000479586 TMED9Q9BVK6 235 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 HIPK2Q9H2X6 1198 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 TUBA4BQ9H853 241 aa13.27□□□□□ -0.29
HMGN1-212ENST00000479586 H2AFY2Q9P0M6 372 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-212ENST00000479586 GNGT2O14610 69 aa13.26□□□□□ -0.29
HMGN1-212ENST00000479586 IGHV3-11P01762 117 aa13.26□□□□□ -0.29
HMGN1-212ENST00000479586 MT-ND2P03891 347 aa13.26□□□□□ -0.29
HMGN1-212ENST00000479586 TMEM225BP0DP42 221 aa13.26□□□□□ -0.29
HMGN1-212ENST00000479586 VHLP40337 213 aa13.26□□□□□ -0.29
HMGN1-212ENST00000479586 ECSCRQ19T08 205 aa13.26□□□□□ -0.29
HMGN1-212ENST00000479586 NXNL2Q5VZ03 156 aa13.26□□□□□ -0.29
HMGN1-212ENST00000479586 C8orf31Q8N9H6 132 aa13.26□□□□□ -0.29
HMGN1-212ENST00000479586 ELOVL1Q9BW60 279 aa13.26□□□□□ -0.29
HMGN1-212ENST00000479586 FAM118AQ9NWS6 357 aa13.26□□□□□ -0.29
HMGN1-212ENST00000479586 GFOD1Q9NXC2 390 aa13.26□□□□□ -0.29
HMGN1-212ENST00000479586 ZNF581Q9P0T4 197 aa13.26□□□□□ -0.29
HMGN1-212ENST00000479586 TAGLN3Q9UI15 199 aa13.26□□□□□ -0.29
HMGN1-212ENST00000479586 A0A1W2PN81 502 aa13.25□□□□□ -0.29
HMGN1-212ENST00000479586 C15orf65H3BRN8 121 aa13.25□□□□□ -0.29
HMGN1-212ENST00000479586 SULT1C4O75897 302 aa13.25□□□□□ -0.29
HMGN1-212ENST00000479586 HLA-DRB1P01911 266 aa13.25□□□□□ -0.29
HMGN1-212ENST00000479586 ANXA8P13928 327 aa13.25□□□□□ -0.29
HMGN1-212ENST00000479586 CHRNA7P36544 502 aa13.25□□□□□ -0.29
HMGN1-212ENST00000479586 PTGES3Q15185 160 aaKnown RBP13.25□□□□□ -0.29
HMGN1-212ENST00000479586 C19orf54Q5BKX5 351 aa13.25□□□□□ -0.29
HMGN1-212ENST00000479586 TMEM244Q5VVB8 128 aa13.25□□□□□ -0.29
HMGN1-212ENST00000479586 SATL1Q86VE3 508 aa13.25□□□□□ -0.29
HMGN1-212ENST00000479586 TCEANCQ8N8B7 351 aa13.25□□□□□ -0.29
HMGN1-212ENST00000479586 OR52M1Q8NGK5 317 aa13.25□□□□□ -0.29
HMGN1-212ENST00000479586 RITA1Q96K30 269 aa13.25□□□□□ -0.29
HMGN1-212ENST00000479586 FBXO7Q9Y3I1 522 aa13.25□□□□□ -0.29
HMGN1-212ENST00000479586 TXNL1O43396 289 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 HSPB1P04792 205 aaKnown RBP13.24□□□□□ -0.29
HMGN1-212ENST00000479586 DBTP11182 482 aaKnown RBP13.24□□□□□ -0.29
HMGN1-212ENST00000479586 ZNF137PP52743 207 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 NDPQ00604 133 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 LSAMPQ13449 338 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 ZSCAN26Q16670 478 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 PIGYQ3MUY2 71 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 TP53I3Q53FA7 332 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 RNLSQ5VYX0 342 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 SLC25A48Q6ZT89 311 aaKnown RBP13.24□□□□□ -0.29
HMGN1-212ENST00000479586 ADGRG5Q8IZF4 528 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 OR10H4Q8NGA5 316 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 OR51A4Q8NGJ6 313 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 ARL11Q969Q4 196 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 FLYWCH2Q96CP2 140 aaKnown RBP13.24□□□□□ -0.29
HMGN1-212ENST00000479586 THAP7Q9BT49 309 aaPredicted RBP13.24□□□□□ -0.29
HMGN1-212ENST00000479586 ANKRD60Q9BZ19 345 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 NDE1Q9NXR1 346 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 GNG8Q9UK08 70 aa13.24□□□□□ -0.29
HMGN1-212ENST00000479586 OR2T7P0C7T2 308 aa13.23□□□□□ -0.29
HMGN1-212ENST00000479586 GZMHP20718 246 aa13.23□□□□□ -0.29
HMGN1-212ENST00000479586 KCNJ3P48549 501 aa13.23□□□□□ -0.29
HMGN1-212ENST00000479586 ACTBP60709 375 aa13.23□□□□□ -0.29
HMGN1-212ENST00000479586 EFNB1P98172 346 aa13.23□□□□□ -0.29
HMGN1-212ENST00000479586 TRIM25Q14258 630 aaKnown RBP13.23□□□□□ -0.29
HMGN1-212ENST00000479586 OR2G2Q8NGZ5 317 aa13.23□□□□□ -0.29
HMGN1-212ENST00000479586 TMEM163Q8TC26 289 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms