RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 PGA5P0DJD9 388 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 IL7P13232 177 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 HIST1H1DP16402 221 aaKnown RBP5.28□□□□□ -1.56
CLDN4-205ENST00000476494 FUT3P21217 361 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 BLVRBP30043 206 aaPredicted RBP5.28□□□□□ -1.56
CLDN4-205ENST00000476494 IER3P46695 156 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 RBM11P57052 281 aaKnown RBP5.28□□□□□ -1.56
CLDN4-205ENST00000476494 ACTBP60709 375 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 ERVK11-1P61568 191 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 CCL8P80075 99 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 TNFAIP6P98066 277 aaPredicted RBP5.28□□□□□ -1.56
CLDN4-205ENST00000476494 MAB21L1Q13394 359 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 DYRK1AQ13627 763 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 RBM39Q14498 530 aaKnown RBP5.28□□□□□ -1.56
CLDN4-205ENST00000476494 RGS21Q2M5E4 152 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 ZNF260Q3ZCT1 412 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 TMEM255AQ5JRV8 349 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 ZFAND6Q6FIF0 208 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 OR10K2Q6IF99 312 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 MZT2BQ6NZ67 158 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 SNX29P2Q8IUI4 249 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 LYSMD2Q8IV50 215 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 FAM58AQ8N1B3 248 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 LYG1Q8N1E2 194 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 POC1AQ8NBT0 407 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 CHST4Q8NCG5 386 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 Q8TCH9 128 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 SLAMF9Q96A28 289 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 MEGF10Q96KG7 1140 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 SDHCQ99643 169 aaPredicted RBP5.28□□□□□ -1.56
CLDN4-205ENST00000476494 C7orf50Q9BRJ6 194 aaKnown RBP5.28□□□□□ -1.56
CLDN4-205ENST00000476494 FGF23Q9GZV9 251 aaPredicted RBP5.28□□□□□ -1.56
CLDN4-205ENST00000476494 RIMS4Q9H426 269 aaPredicted RBP5.28□□□□□ -1.56
CLDN4-205ENST00000476494 BANF2Q9H503 90 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 TMEM165Q9HC07 324 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 ABCB10Q9NRK6 738 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 DECR2Q9NUI1 292 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 PLEKHJ1Q9NW61 149 aa5.28□□□□□ -1.56
CLDN4-205ENST00000476494 RBMX2Q9Y388 322 aaKnown RBP5.28□□□□□ -1.56
CLDN4-205ENST00000476494 LSM4Q9Y4Z0 139 aaKnown RBP5.28□□□□□ -1.56
CLDN4-205ENST00000476494 IGHV1-69-2A0A0G2JMI3 117 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 NAP1L6A6NFF2 107 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 A6NLC8 198 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 FOXI3A8MTJ6 420 aaPredicted RBP5.27□□□□□ -1.57
CLDN4-205ENST00000476494 F5H0A9 414 aaPredicted RBP5.27□□□□□ -1.57
CLDN4-205ENST00000476494 SH2D1BO14796 132 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 SOCS1O15524 211 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 SYNGR1O43759 233 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 ORC5O43913 435 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 PDCD6O75340 191 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 NXPH2O95156 264 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 FSTL3O95633 263 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 PTTG1O95997 202 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 IRF2P14316 349 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 TBPP20226 339 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 BCL3P20749 454 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 FAUP35544 74 aaKnown RBP5.27□□□□□ -1.57
CLDN4-205ENST00000476494 NPBWR2P48146 333 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 TMEM50BP56557 158 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 GNG2P59768 71 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 BPIFB3P59826 476 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 MRPS15P82914 257 aaKnown RBP5.27□□□□□ -1.57
CLDN4-205ENST00000476494 PLA2G7Q13093 441 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 ASAH1Q13510 395 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 ZNF146Q15072 292 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 BAK1Q16611 211 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 SRSF7Q16629 238 aaKnown RBP eCLIP5.27□□□□□ -1.57
CLDN4-205ENST00000476494 SMIM21Q3B7S5 101 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 TCTEX1D4Q5JR98 221 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 STEAP3Q658P3 488 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 SLC35E4Q6ICL7 350 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 WDR82Q6UXN9 313 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 WDR86Q86TI4 376 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 C11orf53Q8IXP5 236 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 C1orf87Q8N0U7 546 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 TOMM5Q8N4H5 51 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 OR4S1Q8NGB4 309 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 OR10AD1Q8NGE0 317 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 OR10K1Q8NGX5 313 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 GPX8Q8TED1 209 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 EMG1Q92979 244 aaKnown RBP5.27□□□□□ -1.57
CLDN4-205ENST00000476494 SEH1LQ96EE3 360 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 OR2V2Q96R30 315 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 NKX3-1Q99801 234 aaPredicted RBP5.27□□□□□ -1.57
CLDN4-205ENST00000476494 CHST6Q9GZX3 395 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 PATZ1Q9HBE1 687 aaKnown RBP5.27□□□□□ -1.57
CLDN4-205ENST00000476494 HES4Q9HCC6 221 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 C1orf123Q9NWV4 160 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 RNF7Q9UBF6 113 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 MTFP1Q9UDX5 166 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 SIGLEC9Q9Y336 463 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 NPTNQ9Y639 398 aa5.27□□□□□ -1.57
CLDN4-205ENST00000476494 A0A0A6YYD4 124 aa5.26□□□□□ -1.57
CLDN4-205ENST00000476494 A0A1W2PP11 408 aa5.26□□□□□ -1.57
CLDN4-205ENST00000476494 A0A1W2PQ09 198 aa5.26□□□□□ -1.57
CLDN4-205ENST00000476494 hCG_1807616A0A1W2PRN6 198 aa5.26□□□□□ -1.57
CLDN4-205ENST00000476494 MCRIP1C9JLW8 97 aa5.26□□□□□ -1.57
CLDN4-205ENST00000476494 MFNGO00587 321 aa5.26□□□□□ -1.57
CLDN4-205ENST00000476494 GEMIN2O14893 280 aaKnown RBP5.26□□□□□ -1.57
CLDN4-205ENST00000476494 DEGS1O15121 323 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms