RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 MBD6Q96DN6 1003 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 HPDLQ96IR7 371 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 IP6K3Q96PC2 410 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 ATF6BQ99941 703 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 PYGO2Q9BRQ0 406 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 SLC17A9Q9BYT1 436 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 CHIAQ9BZP6 476 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 NPFFR1Q9GZQ6 430 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 OR2D2Q9H210 308 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 TCEAL2Q9H3H9 227 aaPredicted RBP3.33□□□□□ -1.88
LSM2-211ENST00000475835 MAP1LC3AQ9H492 121 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 PRDM12Q9H4Q4 367 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 AKTIPQ9H8T0 292 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 NMRAL1Q9HBL8 299 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 HES4Q9HCC6 221 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 HEYLQ9NQ87 328 aaPredicted RBP3.33□□□□□ -1.88
LSM2-211ENST00000475835 CA10Q9NS85 328 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 EHFQ9NZC4 300 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 NUDT4Q9NZJ9 180 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 ST6GALNAC2Q9UJ37 374 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 SH2B3Q9UQQ2 575 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 VDAC3Q9Y277 283 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 FNDC3AQ9Y2H6 1198 aaKnown RBP3.33□□□□□ -1.88
LSM2-211ENST00000475835 LSM2Q9Y333 95 aaKnown RBP3.33□□□□□ -1.88
LSM2-211ENST00000475835 NOP16Q9Y3C1 178 aaKnown RBP3.33□□□□□ -1.88
LSM2-211ENST00000475835 FIS1Q9Y3D6 152 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 LOXL2Q9Y4K0 774 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 IER3IP1Q9Y5U9 82 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 SOX21Q9Y651 276 aaPredicted RBP3.33□□□□□ -1.88
LSM2-211ENST00000475835 THSD7BQ9C0I4 1608 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 PLXNB2O15031 1838 aa3.33□□□□□ -1.88
LSM2-211ENST00000475835 LOC102724200A0A096LPH7 203 aaPredicted RBP3.32□□□□□ -1.88
LSM2-211ENST00000475835 TRBV6-7A0A0A0MS04 114 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 A0A0B4J2E0 115 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 A0A1B0GX12 115 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 TRDV1A0A1B0GX56 115 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 TMEM129A0AVI4 362 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 NPIPB5A8MRT5 1133 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 METTL12A8MUP2 240 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 NPIPB6E9PJ23 425 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 MS4A18H0YCH9 400 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 PYCARD-AS1I3L0S3 204 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 FXYD1O00168 92 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 GNGT2O14610 69 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 GEMIN2O14893 280 aaKnown RBP3.32□□□□□ -1.88
LSM2-211ENST00000475835 CRXO43186 299 aaPredicted RBP3.32□□□□□ -1.88
LSM2-211ENST00000475835 PLPP2O43688 288 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 SYNGR1O43759 233 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 NDUFB6O95139 128 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 SFT2D2O95562 160 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 DUS4LO95620 317 aaKnown RBP3.32□□□□□ -1.88
LSM2-211ENST00000475835 HPXP02790 462 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 HSPB1P04792 205 aaKnown RBP3.32□□□□□ -1.88
LSM2-211ENST00000475835 REG1AP05451 166 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 CXCL1P09341 107 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 LINC00032P0C843 101 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 FAM106CPP0CH98 169 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 LIMS3P0CW19 117 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 LIMS4P0CW20 117 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 MMP9P14780 707 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 EPCAMP16422 314 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 PGCP20142 388 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 CSRP1P21291 193 aaKnown RBP3.32□□□□□ -1.88
LSM2-211ENST00000475835 PPIBP23284 216 aaKnown RBP3.32□□□□□ -1.88
LSM2-211ENST00000475835 CDK2P24941 298 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 CD40P25942 277 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 HRH1P35367 487 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 DRD3P35462 400 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 G6PCP35575 357 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 DIO3P55073 304 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 FOXA1P55317 472 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 UCP3P55916 312 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 GFRA1P56159 465 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 TAS2R46P59540 309 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 YPEL3P61236 119 aaPredicted RBP3.32□□□□□ -1.88
LSM2-211ENST00000475835 MRPS6P82932 125 aaKnown RBP3.32□□□□□ -1.88
LSM2-211ENST00000475835 SRSF3P84103 164 aaKnown RBP3.32□□□□□ -1.88
LSM2-211ENST00000475835 PSG9Q00887 426 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 TIAL1Q01085 375 aaKnown RBP eCLIP3.32□□□□□ -1.88
LSM2-211ENST00000475835 PSG7Q13046 419 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 ADIRFQ15847 76 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 PMCHL1Q16048 86 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 CCL15Q16663 113 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 LRRC75BQ2VPJ9 315 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 TDRG1Q3Y452 100 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 FAM174BQ3ZCQ3 159 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 PLK5Q496M5 336 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 FAM106AQ4KMX7 169 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 SPATA45Q537H7 98 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 TP53I3Q53FA7 332 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 C4orf48Q5BLP8 95 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 TMEM196Q5HYL7 178 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 SOHLH1Q5JUK2 328 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 EEF1DP3Q658K8 133 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 TMEM215Q68D42 235 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 HBMQ6B0K9 141 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 TRNP1Q6NT89 227 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 C11orf87Q6NUJ2 197 aa3.32□□□□□ -1.88
LSM2-211ENST00000475835 TNFAIP8L2Q6P589 184 aaPredicted RBP3.32□□□□□ -1.88
LSM2-211ENST00000475835 TRIM40Q6P9F5 258 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms