RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 UBE2J1Q9Y385 318 aaPredicted RBP6.9□□□□□ -1.3
CNN3-205ENST00000474409 LINC00312Q9Y6C7 94 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 MYO9AB2RTY4 2548 aa6.9□□□□□ -1.31
CNN3-205ENST00000474409 CREBBPQ92793 2442 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 PDZD2O15018 2839 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 CSMD1Q96PZ7 3565 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 LOC105371242A0A075B767 164 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 ZNF729A6NN14 1252 aaPredicted RBP6.89□□□□□ -1.31
CNN3-205ENST00000474409 POM121CA8CG34 1229 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 ZNF736B4DX44 427 aaPredicted RBP6.89□□□□□ -1.31
CNN3-205ENST00000474409 C22orf46C9J442 243 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 FAM157AC9JC47 383 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 FABP7O15540 132 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 ENSAO43768 121 aaKnown RBP6.89□□□□□ -1.31
CNN3-205ENST00000474409 LIPFP07098 398 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 GSTT2BP0CG30 244 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 IL7P13232 177 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 RCC1P18754 421 aaPredicted RBP6.89□□□□□ -1.31
CNN3-205ENST00000474409 FAUP35544 74 aaKnown RBP6.89□□□□□ -1.31
CNN3-205ENST00000474409 TAS2R46P59540 309 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 AP3S2P59780 193 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 ZNF273Q14593 569 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 HMGN3Q15651 99 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 BAK1Q16611 211 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 LTC4SQ16873 150 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 ACTBL2Q562R1 376 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 ZNF880Q6PDB4 577 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 BTNL3Q6UXE8 466 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 Q6ZPA2 131 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 TCF23Q7RTU1 214 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 HOGA1Q86XE5 327 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 TOMM5Q8N4H5 51 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 ZNF565Q8N9K5 539 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 OR5H2Q8NGV7 314 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 C8orf46Q8TAG6 207 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 UBALD1Q8TB05 177 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 IL1F10Q8WWZ1 152 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 SNAPC3Q92966 411 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 SDHCQ99643 169 aaPredicted RBP6.89□□□□□ -1.31
CNN3-205ENST00000474409 OCSTAMPQ9BR26 566 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 REG4Q9BYZ8 158 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 NCOR1P1Q9H4R4 102 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 TAF9BQ9HBM6 251 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 MBNL3Q9NUK0 354 aaKnown RBP6.89□□□□□ -1.31
CNN3-205ENST00000474409 CALYQ9NYX4 217 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 ONECUT1Q9UBC0 465 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 ANXA10Q9UJ72 324 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 RPUSD1Q9UJJ7 312 aaKnown RBP6.89□□□□□ -1.31
CNN3-205ENST00000474409 ANAPC10Q9UM13 185 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 ITPR3Q14573 2671 aa6.89□□□□□ -1.31
CNN3-205ENST00000474409 A0A096LNT2 108 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 PPIAL4CA0A0B4J2A2 164 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 IGHV2-70DA0A0C4DH43 119 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 LINC00854A0A1B0GVQ3 168 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 KIAA1324LA8MWY0 1029 aaPredicted RBP6.88□□□□□ -1.31
CNN3-205ENST00000474409 B4DSR2 109 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 TRDCB7Z8K6 153 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 C12orf77C9JDV5 145 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 SPINT2O43291 252 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 HSPA12AO43301 675 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 LANCL1O43813 399 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 ORC5O43913 435 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 UPK1BO75841 260 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 HBZP02008 142 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 GSTT2P0CG29 244 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 AKAIN1P0CW23 69 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 PPIAL4GP0DN37 164 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 CCL3L1P16619 93 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 ZFP36P26651 326 aaKnown RBP6.88□□□□□ -1.31
CNN3-205ENST00000474409 HLA-DMAP28067 261 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 HRH1P35367 487 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 OR3A3P47888 321 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 LOXL1Q08397 574 aaPredicted RBP6.88□□□□□ -1.31
CNN3-205ENST00000474409 SRSF7Q16629 238 aaKnown RBP eCLIP6.88□□□□□ -1.31
CNN3-205ENST00000474409 C11orf91Q3C1V1 193 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 RNASE10Q5GAN6 216 aaKnown RBP6.88□□□□□ -1.31
CNN3-205ENST00000474409 PRAMEF5Q5TYX0 476 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 Q6ZS49 121 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 ZNF554Q86TJ5 538 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 MAPK1IP1LQ8NDC0 245 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 OR4A4PQ8NGN8 299 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 ARL11Q969Q4 196 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 GALMQ96C23 342 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 KIRREL1Q96J84 757 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 COX4I2Q96KJ9 171 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 GINS4Q9BRT9 223 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 NECAP2Q9NVZ3 263 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 TAS2R3Q9NYW6 316 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 EHFQ9NZC4 300 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 OPN4Q9UHM6 478 aa6.88□□□□□ -1.31
CNN3-205ENST00000474409 ZNF107Q9UII5 783 aaPredicted RBP6.88□□□□□ -1.31
CNN3-205ENST00000474409 RBMX2Q9Y388 322 aaKnown RBP6.88□□□□□ -1.31
CNN3-205ENST00000474409 IGKV1D-8A0A087WSZ0 117 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 KBTBD11-OT1A0A1B0GTJ5 212 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 hCG_1809904A0A1W2PP81 198 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 A0A1W2PPE2 198 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 A0A1W2PR64 198 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 A0A1W2PRV1 198 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 ANKRD20A5PA0PJZ0 165 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 CENPXA8MT69 81 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms